New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4884432	41 (1.290)	6 (0.210)	5/222	NT	14.5%	intergenic (+53/+76)	PP_4293/yedI	hypothetical protein/inner membrane protein
	?	NC_002947	= 4884469	34 (1.200)					intergenic (+90/+39)	PP_4293/yedI	hypothetical protein/inner membrane protein

GACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGCACCACAGCACCTGCGA  >  NC_002947/4884287‑4884581                                                                                                                                                  |                                                                                                                                                      gACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAggg                                                                                                                                                   <  2:174131/150‑1 (MQ=255)    tactGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGAc                                                                                                                                                >  1:33902/1‑150 (MQ=255)       tGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGAcgcg                                                                                                                                             >  1:286068/1‑150 (MQ=255)            gaaCAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttg                                                                                                                                        >  1:403223‑M1/1‑135 (MQ=255)                  gTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAg                                                                                                                                  >  2:445545/1‑150 (MQ=255)                  gTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAg                                                                                                                                  <  1:422507/150‑1 (MQ=255)                         aTCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACCCGCCGGGTGCACGGCAAAcg                                                                                                                           >  2:142795/1‑150 (MQ=255)                          tCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAAcgc                                                                                                                          <  1:442648/150‑1 (MQ=255)                           cAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAAcgcg                                                                                                                         <  2:129556/150‑1 (MQ=255)                            aaGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCgg                                                                                                                        <  1:738695/150‑1 (MQ=255)                            aaGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCgg                                                                                                                        <  1:770438/150‑1 (MQ=255)                            aaGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCgg                                                                                                                        >  1:187546/1‑150 (MQ=255)                                 cAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCt                                                                                                                   <  2:811362/150‑1 (MQ=255)                                  aGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccct                                                                                                                  >  1:337802‑M1/1‑113 (MQ=255)                                    cGATGCCTTCACTACCGACCAGAACCCCATGAGCTTCTTGGTCAAGCTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgt                                                                                                                >  1:185982‑M2/1‑148 (MQ=255)                                     gATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgta                                                                                                               <  2:337802‑M1/150‑41 (MQ=255)                                     gATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgta                                                                                                               <  2:403223‑M1/150‑41 (MQ=255)                                                tACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCACACGCGGTACCTGGTAGGAGCGGGTTc                                                                                                    >  1:669655/1‑150 (MQ=255)                                                    gACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCAccc                                                                                                <  2:187546/150‑1 (MQ=255)                                                     aCCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgtaggagcggg                                                                                                       >  2:139992‑M1/1‑94 (MQ=255)                                                     aCCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgtaggagcggg                                                                                                       <  1:139992‑M1/142‑49 (MQ=255)                                                      ccAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCcgc                                                                                              <  2:33902/150‑1 (MQ=255)                                                            cacCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCAGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGCACCg                                                                                        >  2:223588/1‑150 (MQ=255)                                                             acCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCgg                                                                                       <  1:559182/150‑1 (MQ=255)                                                             acCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCgg                                                                                       <  2:725502/150‑1 (MQ=255)                                                              ccATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCggg                                                                                      <  1:735437/150‑1 (MQ=255)                                                               cATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGATGATACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCgggg                                                                                     >  1:149048/1‑150 (MQ=255)                                                                      ttcttGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCCAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAgcg                                                                              >  1:402003/1‑150 (MQ=255)                                                                         ttGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCt                                                                           >  1:447221/1‑150 (MQ=255)                                                                            gTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCaa                                                                        >  2:530451/1‑150 (MQ=255)                                                                             tCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAGACCGGTCACTGGTAGGAGCGGGGTCACCCGCGAACCGGGGCAAAGCGCCTCAAt                                                                       >  1:697171/1‑150 (MQ=38)                                                                             tCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAAt                                                                       >  1:92493/1‑150 (MQ=255)                                                                              cAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGTAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAAtt                                                                      <  1:445545/150‑1 (MQ=255)                                                                                 ggTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgg                                                                                                        <  2:638229‑M2/113‑11 (MQ=255)                                                                                 ggTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgg                                                                                                        >  1:638229‑M2/1‑103 (MQ=255)                                                                                     cACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTggccggc                                                               <  1:530451/150‑1 (MQ=255)                                                                                      aCTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTggccggcc                                                              >  1:301898/1‑150 (MQ=255)                                                                                        ttCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGa                                                            >  1:726985/1‑150 (MQ=255)                                                                                               cTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAAccgccc                                                     <  1:25261/150‑1 (MQ=255)                                                                                                       gCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAAc                                                                                          >  1:381017/1‑105 (MQ=255)                                                                                                       gCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAAc                                                                                          <  2:381017/105‑1 (MQ=255)                                                                                                       gCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAAt                                             <  1:142795/150‑1 (MQ=255)                                                                                                             ccGCTTTGCGGCCCATTCGCCAGTAAACCCGCTCCGACCGAGGACGCCCCGGGTAAGAGGCAAAGGCGCTACCTGGTAGGAGCCGGCTCACCCGCGGACCGGGGCAAACCGCCCCAATTGGCCGGCCGAACCCCGCGCCACACtttgcac                                       >  2:148740/1‑146 (MQ=255)                                                                                                                       gCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTa                             >  2:718326/1‑150 (MQ=255)                                                                                                                       gCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTa                             >  1:647171/1‑150 (MQ=255)                                                                                                                         ccATTCGCGGGTAAACCCGCTCCTCCAGGGGACGCGCCGGGTTCCAGGCAAACACGGTACCTGGTAGGAGCGGCCAGGTGCGCGAACCGGGGCAAAGCCCATCCATCGGCGGGCCGAACCGCCCGCCACAATTTCCGCGCAACGCTTatc                           >  1:405603/1‑148 (MQ=25)                                                                                                                          cATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTacca                          >  1:137761/1‑150 (MQ=255)                                                                                                                                cgGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCa                    <  2:149048/150‑1 (MQ=255)                                                                                                                                    tAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCAGCCAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGcac                <  2:669655/150‑1 (MQ=255)                                                                                                                                        cccGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaaccttgaccaagaagctcatggtgttctggt                    >  2:139992‑M2/1‑48 (MQ=255)                                                                                                                                        cccGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaaccttgaccaagaagctcatggtgttctggt                    <  1:139992‑M2/142‑95 (MQ=255)                                                                                                                                         ccGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaacc                                                >  1:638229‑M1/1‑10 (MQ=255)                                                                                                                                         ccGCTCCTACcaggtaccgcgtttgccttgaacccggcgcgtcccctgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaacc                                                <  2:638229‑M1/113‑104 (MQ=255)                                                                                                                                         ccGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGCACCACAg           >  2:790737/1‑150 (MQ=255)                                                                                                                                           gCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGCACCACAGCa         >  1:513894/1‑150 (MQ=255)                                                                                                                                                tACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaaccttgaccaagaagctcatggtgttctggtcggtagtgaaggcatc    <  2:403223‑M2/150‑111 (MQ=255)                                                                                                                                                tACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaaccttgaccaagaagctcatggtgttctggtcggtagtgaaggcatc    <  2:337802‑M2/150‑111 (MQ=255)                                                                                                                                                 aCcaggtaccgcgtttgccttgaacccggcgcgtcccctgtaggagcgggtttacccgcgaatgggccgcaaagcggccccgctaactcaggtcagaagtgaagcttgaccaagaagctcatggggttctggtcggtagtgaaggcatcg   >  1:185982‑M1/1‑2 (MQ=255)                                                                                                                                                  cAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGCACCACAGCACCTGCGa  <  2:17638/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      GACTACTGGAAGAACAAGTACGGCATCAAGGACAGCGATGCCTTCACTACCGACCAGAACACCATGAGCTTCTTGGTCAAGGTTCACTTCTGACCTGAGTTAGCGGGGCCGCTTTGCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGACGCGCCGGGTTCAAGGCAAACGCGGTACCTGGTAGGAGCGGGTTCACCCGCGAACCGGGGCAAAGCGCCTCAATTGGCCGGCCGAACCGCCCGCCACAATTTCCCCGCAACGCTTACCACCGCCAGCACCACAGCACCTGCGA  >  NC_002947/4884287‑4884581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.