New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 520774219 (0.600)3 (0.110) 3/222 NT 12.8% intergenic (+32/+82) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
?NC_002947 = 5207793 24 (0.850)intergenic (+83/+31) PP_4588/PP_4589 nitroreductase family oxidoreductase/D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

GCATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5207581‑5207742
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcggTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACT  <  NC_002947/5207793‑5207650
                                                                                                                                                                                                                                                                                                                  
GCATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTG                                                                                                                                                              <  1:134665/150‑1
  ATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGC                                                                                                                                                            <  1:207868/150‑1
           TGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTTCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCG                                                                                                                                                   >  2:602998/1‑150
            GGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG                                                                                                                                                  <  2:721151/150‑1
                                                                 GTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGC                                                                                                                                                            <  1:116662/87‑1
                                                                 GTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGC                                                                                                                                                            >  2:116662/1‑87
                                                                        GCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTTCGAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGA                                                                                      <  1:53822/150‑1
                                                                                                             GAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAG                                                                                                        <  1:21708/95‑1
                                                                                                             GAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAG                                                                                                        >  2:21708/1‑95
                                                                                                                                                         TCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGC              >  1:640432/1‑141
                                                                                                                                                         TCTTCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGC              <  2:640432/141‑1
                                                                                                                                                            TCGCGGTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACT  >  1:118695/1‑150
                                                                                                                                                                                                                                                                                                                  
GCATGCCATGGTGGCGATCGGCAAGCTGGGGGACAAGGCCAGCCTGGATGAAGCCCTGCAGGCGCGTGAAGTGCCGAGCCCGCGCAAGCCGCTGAGCGAGCTGGCTGCTGAAGGCGATTTCAGCCTGTAAGGTTTGTGTTGGCAGTGCTGGCCTCTTCGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5207581‑5207742
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcctcttcgcggTAAAACCGCTTTAGCACAGGGTGGTGATACCCCCCGTAGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACTGCCAACACAAACCTTACAGGCTGAAATCGCCTTCAGCAGCCAGCTCGCTCAGCGGCTTGCGCGGGCTCGGCACT  <  NC_002947/5207793‑5207650

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.