New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5721033 =	33 (1.040)	3 (0.100)	3/234	NT	8.3%	coding (1502/1944 nt)	PP_5021	methyl‑accepting chemotaxis transducer
	?	NC_002947	5721067 =	35 (1.170)					coding (1536/1944 nt)	PP_5021	methyl‑accepting chemotaxis transducer

AGCAAGCGGGTCACTTCGTCGGTACCGTTGTGCAGGCTGTCGATCAGTTGGCCGATCTCCTCGGTCGCCGTCGACGTGCGCTGGGCCAGGCCACGCACCTCATCGGCCACCACGGCAAAGCCGCGCCCGGCCTCACCGGCCCGTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5721183‑5721033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCT  >  NC_002947/5721067‑5721179                                                                                                                                                                                                                                                                          AGCAAGCGGGTCACTTCGTCGGTACCGTTGTGCAGGCTGTCGATCAGTTGGCCGATCTCCTCGGTCGCCGTCGACGTGCGCTGGGCCAGGCCACGCACCTCATCGGCCACCACGGCAAAGCCGCGCCCGGCCTCACCGGCCCGTGCGGCT                                                                                                                    >  2:95942/1‑150                                                                                                                   GCAAAGCCGCGCCCGGCCTCACCGGCCCGTGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCT  >  2:201406/1‑150                                                                                                                       AGCCGCGCCCGGCCTCACCGGCCCGTGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAG                                                         >  1:837161/1‑91                                                                                                                       AGCCGCGCCCGGCCTCACCGGCCCGTGCGGCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAG                                                         <  2:837161/91‑1                                                                                                                                                    GCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAAC                                            >  1:482527/1‑75                                                                                                                                                    GCTTTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAAC                                            <  2:482527/75‑1                                                                                                                                                                                                                                                                          AGCAAGCGGGTCACTTCGTCGGTACCGTTGTGCAGGCTGTCGATCAGTTGGCCGATCTCCTCGGTCGCCGTCGACGTGCGCTGGGCCAGGCCACGCACCTCATCGGCCACCACGGCAAAGCCGCGCCCGGCCTCACCGGCCCGTGCGGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5721183‑5721033 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcttTGCCGTGGTGGCCGATGAGGTGCGTGGCCTGGCCCAGCGCACGTCGACGGCGACCGAGGAGATCGGCCAACTGATCGACAGCCTGCACAACGGTACCGACGAAGTGACCCGCT  >  NC_002947/5721067‑5721179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.