New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5816823	15 (0.470)	4 (0.130)	4/236	NT	20.9%	coding (577/624 nt)	PP_5092	NLP/P60 protein
	?	NC_002947	= 5816856	16 (0.530)					coding (610/624 nt)	PP_5092	NLP/P60 protein

GACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5816670‑5816823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCACCACGTAGTGCTTCTGCCAGTAAGGCTTGCTCAAGGTGTCGATACTCACCCGCTTGCCACGGCGTGGAGCGTGGATGAAGCGGTCGTTACCCAGGTAGATGGCTACGTGA  <  NC_002947/5816856‑5816708                                                                                                                                                                                                                                                                                                                 GACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTG                                                                                                                                                           <  2:739096/150‑1                                 GGTCAATCACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTG                                                                                                                                                           >  1:214251/1‑118                                 GGTCAATCACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTG                                                                                                                                                           <  2:214251/118‑1                                         ACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGG                                                                                                                   >  2:625718/1‑150                                             AGCCATCTACCTGGGTAACGACCGCTTCATCCTCGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCAC                                                                                                               <  1:625718/150‑1                                                                                                          ATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGG                                                                                                                   >  1:732506/1‑85                                                                                                          ATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGG                                                                                                                   <  2:732506/85‑1                                                                                                                                                         CAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCACCACGTAGTGCTTCTGCCAGTAAGGCTTGCTCAAGGTGTCGA                                                                      >  1:808862/1‑83                                                                                                                                                         CAGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCACCACGTAGTGCTTCTGCCAGTAAGGCTTGCTCAAGGTGTCGA                                                                      <  2:808862/83‑1                                                                                                                                                          AGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCACCACGTAGTGCTTCTGCCAGTAAGGCTTGCTCAAGGTGTCGATACTCACCCGCTTGCCACGGCGTGGAGCGTGGATGAAGCGGTCGTTACCCAGGTAGATGGCTACGTGA  <  2:851253/150‑1                                                                                                                                                                                                                                                                                                                 GACCTGATCTTCTTCAACATCAAGAGCCGTCGGGTCAATCACGTAGCCATCTACCTGGGTAACGACCGCTTCATCCACGCTCCACGCCGTGGCAAGCGGGTGAGTATCGACACCTTGAGCAAGCCTTACTGGCAGAAGCACTACGTGGTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5816670‑5816823 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccaGACTCAGCTGCTGCTCTTTCGGCAGCACCCGCTTGGCCACCACGTAGTGCTTCTGCCAGTAAGGCTTGCTCAAGGTGTCGATACTCACCCGCTTGCCACGGCGTGGAGCGTGGATGAAGCGGTCGTTACCCAGGTAGATGGCTACGTGA  <  NC_002947/5816856‑5816708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.