New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 612058530 (0.950)4 (0.130) 3/240 NT 11.9% coding (226/1329 nt) PP_5370 oxidoreductase‑like protein
?NC_002947 = 6120608 30 (0.980)coding (203/1329 nt) PP_5370 oxidoreductase‑like protein

CAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6120463‑6120585
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAGCGAATCGCCTACGGCGCCTCCGGGCGCAACTCGG  <  NC_002947/6120608‑6120573
                                                                                                                                                               
CAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCAGCGAATCGCCTACGGCGCCTCCGGGC           <  1:396915/150‑1
         CAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTAGGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCAGCGAATCGCCTACGGCGCCTCCGGGCGCAACTCGG  <  1:290119/150‑1
                              GTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGC                                        >  1:69330/1‑91
                              GTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGC                                        <  2:69330/91‑1
                                                   TTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCAGCGAATCGCCTACGGCGCCTCCGGGC           <  1:707322/99‑1
                                                   TTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCAGCGAATCGCCTACGGCGCCTCCGGGC           >  2:707322/1‑99
                                                                                                                                                               
CAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6120463‑6120585
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccAGCGAATCGCCTACGGCGCCTCCGGGCGCAACTCGG  <  NC_002947/6120608‑6120573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.