New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 612058530 (0.950)4 (0.130) 3/240 NT 11.9% coding (226/1329 nt) PP_5370 oxidoreductase‑like protein
?NC_002947 = 6120608 30 (0.980)coding (203/1329 nt) PP_5370 oxidoreductase‑like protein

TTCGATGCCGTGACGGCCGATCAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCT  >  NC_002947/6120442‑6120731
                                                                                                                                               |                                                                                                                                                  
ttagATGCCGTGACGGCCGATCAAGGTTTGCAGTTGATCGATGGCTGAGCGGTTTCGGCCCAAGAGCCGTTGCTTATGCTGAGGATCGGGATGTTCGAGGGCCAATTTGTGCGGCATGTCGATGATGAAACCCGACTTGCCCCCGCAGgc                                                                                                                                              >  2:78498/4‑150 (MQ=255)
    aTGCCGTGACGGCCGATCAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCg                                                                                                                                          <  2:395179/150‑1 (MQ=255)
       ccGTGACGGCCTATCAATGTTTGCCGTTGATCTATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAg                                                                                                                                       <  2:323479/150‑1 (MQ=255)
          tGACGGACGATCAATGCTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGACGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCg                                                                                                                                    <  1:724624/150‑1 (MQ=255)
           gACGGCCGATCAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGGGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGa                                                                                                                                   <  2:179462/150‑1 (MQ=255)
                     cAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCagcgaatcgcctacggcgcctccgggc                                                                                                                         <  1:396915‑M1/150‑28 (MQ=255)
                              cAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTAGGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCagcgaatcgcctacggcgcctccgggcgcaactcgg                                                                                                                <  1:290119‑M1/150‑37 (MQ=255)
                                        aTGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATgcgc                                                                                                      >  2:110031/1‑150 (MQ=255)
                                                           ccAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCgg                                                                                   >  1:773001/1‑150 (MQ=255)
                                                             aaGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCa                                                                                            >  2:474505/1‑139 (MQ=255)
                                                             aaGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCa                                                                                            <  1:474505/139‑1 (MQ=255)
                                                                     ttgttTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAgg                                                                              >  2:90738/1‑145 (MQ=255)
                                                                     ttgttTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAgg                                                                              <  1:90738/145‑1 (MQ=255)
                                                                        tttATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCagcgaatcgcctacggcgcctccgggc                                                                                                                         >  2:707322‑M1/1‑72 (MQ=255)
                                                                        tttATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCagcgaatcgcctacggcgcctccgggc                                                                                                                         <  1:707322‑M1/99‑28 (MQ=255)
                                                                         ttATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcg                                                                     <  1:110031/150‑1 (MQ=255)
                                                                          tATGCTGAGGCTCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcgg                                                                    <  1:784329/150‑1 (MQ=255)
                                                                          tATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcgg                                                                    >  1:622564/1‑150 (MQ=255)
                                                                           aTGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcggc                                                                   >  2:812018/1‑150 (MQ=255)
                                                                              cTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCggcggc                                                                <  1:812018/150‑1 (MQ=255)
                                                                                  ggATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGc                                                            >  2:780854/1‑150 (MQ=255)
                                                                                   gATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGcc                                                           >  2:419050/1‑150 (MQ=255)
                                                                                        ggATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCa                                                      >  1:105680/1‑150 (MQ=255)
                                                                                          aTGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTGGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCaaa                                                    <  1:78498/150‑1 (MQ=255)
                                                                                            gTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGc                                                  <  2:773001/150‑1 (MQ=255)
                                                                                                   ggCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCAcc                                           >  1:631478/1‑150 (MQ=255)
                                                                                                                  cAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCaaaa                                                                                                              >  1:621282/1‑68 (MQ=255)
                                                                                                                  cAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCaaaa                                                                                                              <  2:621282/68‑1 (MQ=255)
                                                                                                                        gATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGtt                      >  1:630623/1‑150 (MQ=255)
                                                                                                                              gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATcaccac                                  >  2:596284/1‑132 (MQ=255)
                                                                                                                              gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATcaccac                                  <  1:596284/132‑1 (MQ=255)
                                                                                                                              gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTc                >  2:602612/1‑150 (MQ=255)
                                                                                                                              gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTc                <  1:329521/150‑1 (MQ=255)
                                                                                                                                aaCCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGc              <  2:631478/150‑1 (MQ=255)
                                                                                                                                   ccGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcctaaacaacggctcttgggcctaaaccgctcagccatcgatcaactg           <  1:290119‑M2/150‑115 (MQ=255)
                                                                                                                                            gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaacaacggctcttgggcctaaaccgctcagccatcgatcaactgcaaacattg  <  1:396915‑M2/150‑124 (MQ=255)
                                                                                                                                            gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaa                                                     >  2:707322‑M2/1‑27 (MQ=255)
                                                                                                                                            gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaa                                                     <  1:707322‑M2/99‑73 (MQ=255)
                                                                                                                                            gcCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCgct                                        >  1:753796/1‑110 (MQ=255)
                                                                                                                                            gcCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGAt                                        <  2:753796/112‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                  
TTCGATGCCGTGACGGCCGATCAATGTTTGCAGTTGATCGATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCT  >  NC_002947/6120442‑6120731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.