New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6120585	30 (0.950)	4 (0.130)	3/240	NT	11.9%	coding (226/1329 nt)	PP_5370	oxidoreductase‑like protein
	?	NC_002947	= 6120608	30 (0.980)					coding (203/1329 nt)	PP_5370	oxidoreductase‑like protein

ATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCTTGCTCGGCGCCTGTTCAGG  >  NC_002947/6120482‑6120750                                                                                                                               |                                                                                                                                               aTGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATgcgc                                                                                                                         >  2:110031/1‑150 (MQ=255)                    ccAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCgg                                                                                                      >  1:773001/1‑150 (MQ=255)                      aaGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCa                                                                                                               >  2:474505/1‑139 (MQ=255)                      aaGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCa                                                                                                               <  1:474505/139‑1 (MQ=255)                              ttgttTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAgg                                                                                                 >  2:90738/1‑145 (MQ=255)                              ttgttTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAgg                                                                                                 <  1:90738/145‑1 (MQ=255)                                  ttATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcg                                                                                        <  1:110031/150‑1 (MQ=255)                                   tATGCTGAGGCTCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcgg                                                                                       <  1:784329/150‑1 (MQ=255)                                   tATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcgg                                                                                       >  1:622564/1‑150 (MQ=255)                                    aTGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTgcggc                                                                                      >  2:812018/1‑150 (MQ=255)                                       cTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCggcggc                                                                                   <  1:812018/150‑1 (MQ=255)                                           ggATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGc                                                                               >  2:780854/1‑150 (MQ=255)                                            gATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGcc                                                                              >  2:419050/1‑150 (MQ=255)                                                 ggATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCa                                                                         >  1:105680/1‑150 (MQ=255)                                                   aTGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTGGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCaaa                                                                       <  1:78498/150‑1 (MQ=255)                                                     gTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGc                                                                     <  2:773001/150‑1 (MQ=255)                                                            ggCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCAcc                                                              >  1:631478/1‑150 (MQ=255)                                                                           cAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCaaaa                                                                                                                                 >  1:621282/1‑68 (MQ=255)                                                                           cAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCaaaa                                                                                                                                 <  2:621282/68‑1 (MQ=255)                                                                                 gATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGtt                                         >  1:630623/1‑150 (MQ=255)                                                                                       gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATcaccac                                                     >  2:596284/1‑132 (MQ=255)                                                                                       gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATcaccac                                                     <  1:596284/132‑1 (MQ=255)                                                                                       gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTc                                   <  1:329521/150‑1 (MQ=255)                                                                                       gAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTc                                   >  2:602612/1‑150 (MQ=255)                                                                                         aaCCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGc                                 <  2:631478/150‑1 (MQ=255)                                                                                            ccGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcctaaacaacggctcttgggcctaaaccgctcagccatcgatcaactg                              <  1:290119‑M2/150‑115 (MQ=255)                                                                                                     gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaacaacggctcttgggcctaaaccgctcagccatcgatcaactgcaaacattg                     <  1:396915‑M2/150‑124 (MQ=255)                                                                                                     gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaa                                                                        >  2:707322‑M2/1‑27 (MQ=255)                                                                                                     gcCCGGAGGCGCCGTAGGCGATTCGCTgggcgcaactcgggtttcgtcatcgacctgccgcacaaattcgccctcgaacatcccgatcctcagcataaa                                                                        <  1:707322‑M2/99‑73 (MQ=255)                                                                                                     gcCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCgct                                                           >  1:753796/1‑110 (MQ=255)                                                                                                     gcCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGAt                                                           <  2:753796/112‑1 (MQ=255)                                                                                                                     ggCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCTTGCTCGGCGCCTGTTc     <  2:622564/150‑1 (MQ=255)                                                                                                                      gCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCAAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCTTGCTCGGCGCCTGTTCa    <  2:105680/150‑1 (MQ=255)                                                                                                                        gATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCTTGCTCGGCGCCTGTTCAgg  <  1:419050/150‑1 (MQ=255)                                                                                                                               |                                                                                                                                               ATGGCTGAGCGGTTTAGGCCCAAGAGCCGTTGTTTATGCTGAGGATCGGGATGTTCGAGGGCGAATTTGTGCGGCAGGTCGATGACGAAACCCGAGTTGCGCCCGGAGGCGCCGTAGGCGATTCGCTGGGCATCTACCAAAACAATGCGCGACTGCGGCAGGTGCTCGGCCAGGCGCCGTGCGGCGGCAAGCCCAGCAAAGCCAGCACCGATCACCACATAATCGGCGTTATGTTCGCCACTTAGGCGCTTGCTCGGCGCCTGTTCAGG  >  NC_002947/6120482‑6120750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.