New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3482829 =	31 (0.980)	5 (0.160)	4/240	NT	14.1%	coding (3138/3804 nt)	PP_3091	membrane protein
	?	NC_002947	3482877 =	31 (1.010)					coding (3090/3804 nt)	PP_3091	membrane protein

TGCCGATTTCGTTGCGTTTGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCG  >  NC_002947/3482684‑3482975                                                                                                                                                  |                                                                                                                                                   tGCCGATTTCGTTGCGTTTGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATctgct                                                                                                                                                <  1:502054/150‑1 (MQ=255)   tcagcgagaccctggaaggccagccgagcgagatcaccaccgtgcgcaactacgtggaaagcagcgtcgacaccagcccgggggacaaatcgcgcgcgctgcaggggctgttcagcatccctatccaggaggcctgtgcgaccCtgctgc                                                                                                                                              <  1:15683‑M1/7‑1 (MQ=255)       tttCGTTGCGTTTGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGccc                                                                                                                                          <  1:12557/150‑1 (MQ=255)             tGCGTTTGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCt                                                                                                                                    <  2:812951/150‑1 (MQ=255)                 tttGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGc                                                                                                                                >  1:475832/1‑150 (MQ=255)                      aGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCt                                                                                                                           >  2:98948/1‑150 (MQ=255)                           ggCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCg                                                                                                                      >  2:825925/1‑150 (MQ=255)                                  ggCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCgccggccg                                                                                                               >  1:33950/1‑150 (MQ=255)                                          ccgtgcgcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccgtccagtatgcctgggcgaccCTGC‑‑‑GCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAgg                                                                                                    >  1:611777‑M1/105‑150 (MQ=255)                                           cGGGATCTATGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCa                                                                                                      <  2:310555/150‑1 (MQ=255)                                              gcgcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAggg                                                                                                   >  2:15683‑M1/101‑150 (MQ=255)                                                gcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                 >  2:44126‑M1/99‑150 (MQ=255)                                                       aGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAgg                                                                                          >  1:577883/1‑150 (MQ=255)                                                           ttGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATa                                                                                      <  2:845055/150‑1 (MQ=255)                                                               aGGTCTTTCACCGAAGCGGCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTgg                                                                                  >  1:457655/1‑150 (MQ=255)                                                               aGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTgg                                                                                  <  2:577883/150‑1 (MQ=255)                                                                           gAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTg                                                                      >  1:592912/1‑150 (MQ=255)                                                                               ccTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACa                                                                  >  1:704110/1‑150 (MQ=255)                                                                               ccTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACa                                                                  <  2:475832/150‑1 (MQ=255)                                                                                 tCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCgccg                                                                                                                   >  1:801137/1‑99 (MQ=255)                                                                                 tCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCgccg                                                                                                                   <  2:801137/99‑1 (MQ=255)                                                                                          tgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                 >  1:607951‑M1/57‑108 (MQ=255)                                                                                          tgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                 <  2:607951‑M1/52‑1 (MQ=255)                                                                                          ctgctgCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCagc                                                       >  2:258586/1‑150 (MQ=255)                                                                                                              aCGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTTGCGATAAGCTCGCCAGTCAGGCAGTGTTTAAGTTACTTTACTTACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCctg                                   >  1:619371/1‑150 (MQ=255)                                                                                                               cGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCctgg                                  <  1:825925/150‑1 (MQ=255)                                                                                                                      ccATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                             <  2:803553/132‑1 (MQ=255)                                                                                                                      ccATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                             >  1:803553/1‑132 (MQ=255)                                                                                                                       cATGACCTTCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTc                          >  2:783152/1‑150 (MQ=255)                                                                                                                         tGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGa                        <  2:33950/150‑1 (MQ=255)                                                                                                                            ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCgcc                                                                                                                    >  1:380332/1‑55 (MQ=255)                                                                                                                            ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCgcc                                                                                                                    <  2:380332/55‑1 (MQ=255)                                                                                                                            ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAgg                                                                         <  2:719490/98‑1 (MQ=255)                                                                                                                            ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAgg                                                                         >  1:719490/1‑98 (MQ=255)                                                                                                                              tGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCAACgctg                   <  2:592912/150‑1 (MQ=255)                                                                                                                                   ccAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTcgc                                                                                                         <  2:404545/59‑1 (MQ=255)                                                                                                                                   ccAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTcgc                                                                                                         >  1:404545/1‑59 (MQ=255)                                                                                                                                   ccAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTc              >  2:598095/1‑150 (MQ=255)                                                                                                                                               gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGgtg                            >  1:848417/1‑124 (MQ=255)                                                                                                                                               gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGgtg                            <  2:848417/124‑1 (MQ=255)                                                                                                                                               gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTgcg  <  2:762377/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                   TGCCGATTTCGTTGCGTTTGAAGGCCGGCAGCAGGCCGCTGTCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCG  >  NC_002947/3482684‑3482975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.