New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3482829 =	31 (0.980)	5 (0.160)	4/240	NT	14.1%	coding (3138/3804 nt)	PP_3091	membrane protein
	?	NC_002947	3482877 =	31 (1.010)					coding (3090/3804 nt)	PP_3091	membrane protein

TCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATCTCGCTCGGCTGGCCTTCCAGGGTCTCGCTGA  >  NC_002947/3482725‑3483019                                                                                                                                                         |                                                                                                                                               ccgtgcgcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccgtccagtatgcctgggcgaccCTGC‑‑‑GCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAgg                                                                                                                                                >  1:611777‑M1/105‑150 (MQ=255)     gcgcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAggg                                                                                                                                               >  2:15683‑M1/101‑150 (MQ=255)       gcaactacgtggaaagcagcgtcgacaccagccaggatggcctgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                                                             >  2:44126‑M1/99‑150 (MQ=255)              aGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAgg                                                                                                                                      >  1:577883/1‑150 (MQ=255)                  ttGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATa                                                                                                                                  <  2:845055/150‑1 (MQ=255)                      aGGTCTTTCACCGAAGCGGCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTgg                                                                                                                              >  1:457655/1‑150 (MQ=255)                      aGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTgg                                                                                                                              <  2:577883/150‑1 (MQ=255)                                  gAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTg                                                                                                                  >  1:592912/1‑150 (MQ=255)                                      ccTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACa                                                                                                              <  2:475832/150‑1 (MQ=255)                                      ccTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACa                                                                                                              >  1:704110/1‑150 (MQ=255)                                                 tgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                                                             >  1:607951‑M1/57‑108 (MQ=255)                                                 tgtcgcgctcgctgcaggggctgttcagcctgcccatccagtatgcctgggcgaccCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTc                                                                                                                                             <  2:607951‑M1/52‑1 (MQ=255)                                                 ctgctgCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCagc                                                                                                   >  2:258586/1‑150 (MQ=255)                                                                     aCGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTTGCGATAAGCTCGCCAGTCAGGCAGTGTTTAAGTTACTTTACTTACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCctg                                                                               >  1:619371/1‑150 (MQ=255)                                                                      cGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCctgg                                                                              <  1:825925/150‑1 (MQ=255)                                                                             ccATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                                                                         <  2:803553/132‑1 (MQ=255)                                                                             ccATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                                                                         >  1:803553/1‑132 (MQ=255)                                                                              cATGACCTTCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTc                                                                      >  2:783152/1‑150 (MQ=255)                                                                                tGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGa                                                                    <  2:33950/150‑1 (MQ=255)                                                                                   ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAgg                                                                                                                     <  2:719490/98‑1 (MQ=255)                                                                                   ccTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAgg                                                                                                                     >  1:719490/1‑98 (MQ=255)                                                                                     tGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCAACgctg                                                               <  2:592912/150‑1 (MQ=255)                                                                                          ccAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTc                                                          >  2:598095/1‑150 (MQ=255)                                                                                                     gaccctgcgcgacccggccggcgagcagatcgccaaggcctgggcgcagcagGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                                                                         <  2:607951‑M2/56‑1 (MQ=255)                                                                                                     gaccctgcgcgacccggccggcgagcagatcgccaaggcctgggcgcagcagGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACa                                                                                         >  1:607951‑M2/53‑108 (MQ=255)                                                                                                     gaccctgcgcgacccggccggcgagcagatcgccaaggcctgggcgcagcagGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTgc                                               >  2:44126‑M2/53‑150 (MQ=255)                                                                                                      gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGgtg                                                                        >  1:848417/1‑124 (MQ=255)                                                                                                      gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGgtg                                                                        <  2:848417/124‑1 (MQ=255)                                                                                                      gATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTgcg                                              <  2:762377/150‑1 (MQ=255)                                                                                                       ccctgcgcgacccggccggcgagcagatcgccaaggcctgggcgcagcagGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTgcgc                                             >  2:15683‑M2/51‑150 (MQ=255)                                                                                                           cctgcgcgacccggccggcgagcagatcgccaaggcctgggcgcagGGTCGCCCAGGCATACTGGACGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACgg                                         >  1:611777‑M2/47‑150 (MQ=255)                                                                                                             tgcGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACggtg                                       <  1:783152/150‑1 (MQ=255)                                                                                                                gcCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGgtggtg                                    >  1:296800/1‑150 (MQ=255)                                                                                                                  ccAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGAt                                  <  2:296800/150‑1 (MQ=255)                                                                                                                   cAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGAtc                                 >  1:501261/1‑150 (MQ=255)                                                                                                                      gCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATctcg                              <  1:98948/150‑1 (MQ=255)                                                                                                                       ccTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATctcgc                             >  1:466148/1‑150 (MQ=255)                                                                                                                         ttGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCct                                                                                <  1:719630/97‑1 (MQ=255)                                                                                                                         ttGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCct                                                                                >  2:719630/1‑97 (MQ=255)                                                                                                                         ttGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATctcgctc                           >  1:589037/1‑150 (MQ=255)                                                                                                                             cGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATCTCGCTCGGCt                       <  1:598095/150‑1 (MQ=255)                                                                                                                                                  gcagcagGGTCGCACAGGCCTCCTGGATAGGGATGCTGAACAGCCCCTGCAGCGCGCGCGATTTGTCCCCCGGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATCTCGCTCGGCTGGCCTTCCAGGGTCTCGCTGa  <  1:15683‑M2/143‑1 (MQ=255)                                                                                                                                                         |                                                                                                                                               TCGGGATCTACGAAGCGTTGCAGGTCTTTCACCGAAGCCTCGTTGCGGCTGCTGCCGGCAATCGGGTAACGGTGTGCCATGACCTGCTCCCAGGGCTTGGCGATCTGCTGCGCCCAGGCCTTGGCGATCTGCTCGCCGGCCGGGTCGCGCAGGGTCGCCCAGGCATACTGGATGGGCAGGCTGAACAGCCCCTGCAGCGAGCGCGACAGGCCATCCTGGCTGGTGTCGACGCTGCTTTCCACGTAGTTGCGCACGGTGGTGATCTCGCTCGGCTGGCCTTCCAGGGTCTCGCTGA  >  NC_002947/3482725‑3483019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.