New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3950580	51 (1.610)	4 (0.130)	4/234	NT	7.3%	coding (501/1491 nt)	PP_3486	cytochrome c
	?	NC_002947	= 3950602	53 (1.770)					coding (479/1491 nt)	PP_3486	cytochrome c

TCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAGCGTGGCATGGC  >  NC_002947/3950434‑3950729                                                                                                                                                   |                                                                                                                                                       tCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCt                                                                                                                                                     >  2:539815/1‑150 (MQ=255) tCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCt                                                                                                                                                     <  1:373900/150‑1 (MQ=255) tCGAGCAACTGTTGCAAGGCGCGTCAGATGCTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCCCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCCTCTTCCAGCACGGCACGCACCACCTGCCCGGCt                                                                                                                                                     <  1:430187/150‑1 (MQ=255)    ggCAACTGTTGCAAGGCGCGTTCGGAACTGCCCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCg                                                                                                                                                  <  2:328301/149‑1 (MQ=255)     gCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTGCCAGCACGGCACGCACCACCTGCCCGGCTTCgg                                                                                                                                                 <  1:746048/150‑1 (MQ=255)       aaCTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGcc                                                                                                                                               >  2:655355/1‑150 (MQ=255)        aCTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCa                                                                                                                                              <  1:442099/150‑1 (MQ=255)          tGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGc                                                                                                                                            >  1:351460/1‑150 (MQ=255)           gTTGCGAGGCGCGTTCGGCACTGCCCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCATCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCg                                                                                                                                           <  2:210038/150‑1 (MQ=255)                              cctGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCTTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGcgagcggtccgctggccgaagccgggcaggtg                                                                                                                        <  1:715937‑M1/149‑33 (MQ=255)                                  aCCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTg                                                                                                                    >  1:636162/1‑150 (MQ=255)                                  aCCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCAGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTg                                                                                                                    >  2:163134/1‑150 (MQ=255)                                   ccGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACG‑‑‑CTGCTGCCCGcgagcggtccgctggccgaagccgggcaggtggtgcgtgc                                                                                                                <  1:48738‑M1/150‑41 (MQ=255)                                    cGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGcc                                                                                                                  >  2:228380/1‑150 (MQ=255)                                    cGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGAACGCACCGCCTGCCCTCCTACGGCCAGCGGGCCTCTCGCGGGCAGCAGCGTGcc                                                                                                                  >  2:684292/1‑150 (MQ=255)                                           gAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGgcg‑c                                                                                                          <  1:592582/150‑1 (MQ=255)                                            aaCCTGGCTGGAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCg‑ca                                                                                                         <  1:36309/150‑1 (MQ=255)                                              ccTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGCGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCg‑cagc                                                                                                       >  2:195543/1‑150 (MQ=255)                                                 gggTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGgcg‑c                                                                                                          >  2:377106/1‑144 (MQ=255)                                                 gggTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGgcg‑c                                                                                                          <  1:377106/144‑1 (MQ=255)                                                        gTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCcctcct                                                                                             >  2:257908/1‑150 (MQ=255)                                                           cGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCca                                                                                          <  2:167723/150‑1 (MQ=255)                                                                 gTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAg                                                                                    <  1:257908/150‑1 (MQ=255)                                                                  ttCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAgg                                                                                   <  2:456052/150‑1 (MQ=255)                                                                     cAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTc                                                                                >  1:293405/1‑150 (MQ=255)                                                                               ccGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGgc                                                                                                             >  2:190916/1‑112 (MQ=255)                                                                               ccGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGgc                                                                                                             <  1:190916/112‑1 (MQ=255)                                                                                      tGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGc                                                               >  1:63313/1‑150 (MQ=255)                                                                                      tGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGc                                                               >  1:754596/1‑150 (MQ=255)                                                                                          gccTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGttt                                                           <  1:539815/150‑1 (MQ=255)                                                                                          gccTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGttt                                                           <  2:63313/150‑1 (MQ=255)                                                                                            cTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTga                                                         >  1:565928/1‑150 (MQ=255)                                                                                                   gttgagttgaCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAgg                                                                                   <  1:114065/117‑1 (MQ=255)                                                                                                   gttgagttgaCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAgg                                                                                   >  2:114065/1‑117 (MQ=255)                                                                                                     tgagttgaCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCgg                                                <  1:125424/150‑1 (MQ=255)                                                                                                            aCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGttt                                                           <  2:4704/132‑1 (MQ=255)                                                                                                            aCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGttt                                                           >  1:4704/1‑132 (MQ=255)                                                                                                            aCCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGtt                                         <  2:293405/150‑1 (MQ=255)                                                                                                              ccACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGcgagcggtccgctggccgaagccgggcaggtgg                                                                                                                       >  1:242030‑M1/1‑38 (MQ=255)                                                                                                              ccACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGcgagcggtccgctggccgaagccgggcaggtgg                                                                                                                       <  2:242030‑M1/71‑34 (MQ=255)                                                                                                              ccAAGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTgc                                       >  2:364498/1‑150 (MQ=255)                                                                                                                aCGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGc                                                                    <  2:827575/119‑1 (MQ=255)                                                                                                                aCGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGc                                                                    >  1:827575/1‑119 (MQ=255)                                                                                                                aCGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTgcgc                                     <  2:636162/150‑1 (MQ=255)                                                                                                                 cGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGATCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGtt                                                            >  2:636820/1‑126 (MQ=255)                                                                                                                 cGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGATCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGtt                                                            <  1:636820/126‑1 (MQ=255)                                                                                                                        ttCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggca                                                                                                                            >  1:6649‑M2/1‑50 (MQ=255)                                                                                                                        ttCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggca                                                                                                                            <  2:6649‑M2/56‑7 (MQ=255)                                                                                                                            aGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGt                                                             >  2:145609/1‑114 (MQ=255)                                                                                                                            aGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGt                                                             <  1:145609/114‑1 (MQ=255)                                                                                                                            aGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAg                         <  2:565928/150‑1 (MQ=255)                                                                                                                              cacggcacgCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGt                       <  1:655355/150‑1 (MQ=255)                                                                                                                                 ggcacgCACCACCTGCCCTGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAg                    <  2:351460/150‑1 (MQ=255)                                                                                                                                  gcacgcacCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggcagcagcgtgccgtgctggaagacggcgtgggtcaactcaaccagcaaggcggcattcacgggcggcgcctggaactggtcgtactagacccaggttccgacccgg                    <  1:48738‑M2/150‑111 (MQ=255)                                                                                                                                   cacgcacCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAg                                            >  1:606103/1‑124 (MQ=255)                                                                                                                                   cacgcacCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAg                                            <  2:606103/124‑1 (MQ=255)                                                                                                                                       caccacCTGCCCAGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGaa              <  1:163134/150‑1 (MQ=255)                                                                                                                                        accaccTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAg             <  1:10295/150‑1 (MQ=255)                                                                                                                                         ccaccTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggcaggtggtgcgtgccgtgctggaagacggcgtgg                                                                                            <  2:242030‑M2/71‑39 (MQ=255)                                                                                                                                         ccaccTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggcaggtggtgcgtgccgtgctggaagacggcgtgg                                                                                            >  1:242030‑M2/1‑33 (MQ=255)                                                                                                                                          caccTGCCCGGCTTCGGCCAGCGGACCGCTCGcgggcaggtggtgcgtgccgtgctggaagacggcgtgggtcaactcaaccagcaaagcggcattcacgggcggcgcctggaactggtcgtactagacccaggttccgacccggtcagg            <  1:715937‑M2/150‑119 (MQ=255)                                                                                                                                          caccTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCa                                                                                     <  2:462895/76‑1 (MQ=255)                                                                                                                                          caccTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCa                                                                                     >  1:462895/1‑76 (MQ=255)                                                                                                                                             cTGCCCGGCTTCTGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCGCCAACGCTACCGCGAGTGC‑CCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAGCGTgg        <  1:195543/150‑1 (MQ=255)                                                                                                                                              tGCCCGcgagcggtccgctggccgaagccgggcaggtggtgcgtgccgtgctggaa                                                                                                      <  2:6649‑M1/56‑51 (MQ=255)                                                                                                                                              tGCCCGcgagcggtccgctggccgaagccgggcaggtggtgcgtgccgtgctggaa                                                                                                      >  1:6649‑M1/1‑6 (MQ=255)                                                                                                                                                cccGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAGCGTGGCAt     >  2:205036/1‑150 (MQ=255)                                                                                                                                                   ggCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAGCGTGGCATGGc  >  1:175505/1‑150 (MQ=255)                                                                                                                                                   |                                                                                                                                                       TCGAGCAACTGTTGCAAGGCGCGTTCGGCACTGACCGGGTCGGAACCTGGGTCTAGTACGACCAGTTCCAGGCGCCGCCCGTGAATGCCGCCTTGCTGGTTGAGTTGACCCACGCCGTCTTCCAGCACGGCACGCACCACCTGCCCGGCTTCGGCCAGCGGACCGCTCGCGGGCAGCAGCGTGCCAAGGCG‑CAGCACGCCCTCCTCCACACCAGGGTCGCGTTCATCGGCCAAGCGTTTGAGATAGGCGGTGAGGTTGCGCTGGTCGGCCAAGGTCAGTTCGAAGCGTGGCATGGC  >  NC_002947/3950434‑3950729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.