New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1432044	29 (0.920)	4 (0.140)	4/232	NT	12.1%	coding (117/1092 nt)	xenA	protein XenA
	?	NC_002947	= 1432069	31 (1.050)					coding (142/1092 nt)	xenA	protein XenA

GCACTGTTCGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGG  >  NC_002947/1431934‑1432216                                                                                                                                        |                                                                                                                                                     gCACTGTTCGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTg                                                                                                                                        >  1:467083/1‑150 (MQ=255) gCACTGTTCGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTg                                                                                                                                        <  1:302592/150‑1 (MQ=255)   aCTGTTCGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCt                                                                                                                                      >  2:468523/1‑150 (MQ=255)     tttacGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCtgg                                                                                                                                    >  1:166452/5‑150 (MQ=255)            aCCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGa                                                                                                                             <  1:315434/150‑1 (MQ=255)              ccTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGGTTGCTGGTGGTCGAgg                                                                                                                           <  1:839858/150‑1 (MQ=255)                      cTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCActgct                                                                                                                   <  2:166452/150‑1 (MQ=255)                      cTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCActgct                                                                                                                   >  2:462357/1‑150 (MQ=255)                          aaGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTgg                                                                                                               <  1:247941/150‑1 (MQ=255)                                    ccTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCgtg                                                                                                                                                      >  1:736480/1‑101 (MQ=255)                                    ccTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCgtg                                                                                                                                                      <  2:736480/101‑1 (MQ=255)                                    ccTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCgg                                                                                                                                            <  1:370941/111‑1 (MQ=255)                                    ccTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCgg                                                                                                                                            >  2:370941/1‑111 (MQ=255)                                      tGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGc                                                                                                  <  2:467083/150‑1 (MQ=255)                                               gTATCGCCATTCCGCCGATGTGCCAGAACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGGGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGGGGAGCAGG‑AAAGGCGTATCAccc                                                                                         >  2:599599/1‑150 (MQ=255)                                                  tCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑aa                                                                                                      <  2:260353/134‑1 (MQ=255)                                                  tCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑aa                                                                                                      >  1:260353/1‑134 (MQ=255)                                                   cGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGAAGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCgg                                                                                     >  2:210959/1‑150 (MQ=255)                                                                     ccAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGgtggtgccagtcgttgatcatgccgtcttcggcc                                                                                                                    >  1:559311‑M2/1‑68 (MQ=255)                                                                     ccAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGgtggtgccagtcgttgatcatgccgtcttcggcc                                                                                                                    <  2:559311‑M2/102‑35 (MQ=255)                                                                         tACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGAt                                                               <  2:385834/150‑1 (MQ=255)                                                                                 cGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGc                                                       >  1:817501/1‑150 (MQ=255)                                                                                    aGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCa                                                    >  2:74869/1‑150 (MQ=255)                                                                                    aGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCa                                                    <  2:726233/150‑1 (MQ=255)                                                                                        ggCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCg                                                >  2:75705/1‑150 (MQ=255)                                                                                          cATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGtt                                              <  1:75705/150‑1 (MQ=255)                                                                                              aTCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTa                                          >  2:47111/1‑150 (MQ=255)                                                                                                     aCTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCggtgg                                   <  1:187985/150‑1 (MQ=255)                                                                                                      cTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCggtggt                                  <  1:462357/150‑1 (MQ=255)                                                                                                           accacGTTCACCTGGCCGGCCTGGCCCGTGgtggtgccagtcgttgatcatgccgtcttcggccatgtactggcacatcggcggaatggcga                                                                                        <  1:645610‑M2/92‑63 (MQ=255)                                                                                                           accacGTTCACCTGGCCGGCCTGGCCCGTGgtggtgccagtcgttgatcatgccgtcttcggccatgtactggcacatcggcggaatggcga                                                                                        >  2:645610‑M2/1‑30 (MQ=255)                                                                                                           accacGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCGCTGCTGTGGGGCCGGCGAGGAGGCAACCCACGCGG‑AAAGGGGGTAGCTGGAGCGATGCCCACGCTCAGGCCTTCGTACCCGCGGTGGAgg                             >  1:831483/1‑150 (MQ=255)                                                                                                            ccacGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTAGTACCGGTGGTGCAGGc                            >  2:720412/1‑150 (MQ=255)                                                                                                                           cggccTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTc                                             <  1:43985/118‑1 (MQ=255)                                                                                                                           cggccTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTc                                             >  2:43985/1‑118 (MQ=255)                                                                                                                           cggccTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCgg             >  2:281310/1‑150 (MQ=255)                                                                                                                               cTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCt                                                                       >  1:821462/1‑88 (MQ=255)                                                                                                                               cTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCt                                                                       <  2:821462/88‑1 (MQ=255)                                                                                                                                   cccGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGc     <  1:281310/150‑1 (MQ=255)                                                                                                                                    ccGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGcc    >  1:135497/1‑150 (MQ=255)                                                                                                                                      ttggtggtgCCCGCGTGCTGGTGCTCGAGGCCCCTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCgg  <  2:831483/149‑1 (MQ=255)                                                                                                                                        |                                                                                                                                                     GCACTGTTCGAACCCTACACCCTCAAAGACGTCACCCTGCGTAACCGTATCGCCATTCCGCCGATGTGCCAGTACATGGCCGAAGACGGCATGATCAACGACTGGCACCACGTTCACCTGGCCGGCCTGGCCCGTGGTGGTGCCGGCTTGCTGGTGGTCGAGGCCACTGCTGTGGCGCCGG‑AAGGGCGTATCACCCCCGGTTGCGCCGGTATCTGGAGCGATGCCCACGCTCAGGCGTTCGTACCGGTGGTGCAGGCCATCAAGGCTGCCGGTTCCGTGCCGG  >  NC_002947/1431934‑1432216

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.