| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 469835 | 15 (1.150) | 4 (0.310) | 4/268 | 1.1 | 21.8% | coding (1125/3744 nt) | PP_0386 | sensory box protein |
| ? | NC_002947 | = 469886 | 14 (1.100) | coding (1074/3744 nt) | PP_0386 | sensory box protein | |||||
CCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/469763‑469835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGAGACCGCAGCGGGGCGCGACCACAGCCTGGACTACCGGGTGATCCGGGCTGACGGTCAGCCCCTCTGGGTACGCAATATCGTCAGCATGATC < NC_002947/469886‑469739 CCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGA < 1:127930/130‑1CCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGA > 2:127930/1‑130 TCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGAGA > 1:13005/1‑116 TCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGAGA < 2:13005/116‑1 TGGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGAGACCGCAGCGGGGCGCGACCACAGCCTGGACTACCGGGTGATCCGGGCTGACGGTCAGCCCCTCTGGGTACGCAATATCGTCAGCATGATC < 2:256069/150‑1 CCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/469763‑469835‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgGCGCAGCATCCTGCACCCGGAGGACGCGCTCTGGGCTCAGGCCTACTGCGACAGCGAGACCGCAGCGGGGCGCGACCACAGCCTGGACTACCGGGTGATCCGGGCTGACGGTCAGCCCCTCTGGGTACGCAATATCGTCAGCATGATC < NC_002947/469886‑469739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |