New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 469835	15 (1.150)	4 (0.310)	4/268	1.1	21.8%	coding (1125/3744 nt)	PP_0386	sensory box protein
	?	NC_002947	= 469886	14 (1.100)					coding (1074/3744 nt)	PP_0386	sensory box protein

TGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTT  >  NC_002947/469693‑469983                                                                                                                                               |                                                                                                                                                     tGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGt                                                                                                                                               >  1:286117/1‑150 (MQ=255)     ttCGATCATCATCCCGCACATCACTAGCTGTTGGCCGTGCTCGATCATTCTGACGATATTGCGTACCCAGAGTGGCTGACCGTCAGCCCTGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGc                                                                                                                                           <  1:121710/149‑1 (MQ=255)       cGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCt                                                                                                                                         <  1:266431/150‑1 (MQ=255)          tcatcaGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAg                                                                                                                                      >  1:209570/1‑150 (MQ=255)                 cccGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCagag                                                                                                                               <  1:263749/150‑1 (MQ=255)                                               gATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCca                                                                                                 <  2:256069‑M2/150‑3 (MQ=255)                                                   aggCTGACGATGTTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCGGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGaaa                                                                                             <  2:296557/148‑1 (MQ=255)                                                           gATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCt                                                                                     >  1:280063/1‑150 (MQ=255)                                                                 gCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGTGCCCCGCTGCGGTCTCGTTGTCGCAGTAGGCCTGAGCGCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCa                                                                               <  1:58171/150‑1 (MQ=255)                                                                       ccAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGgcgcagcatcctgcacccggaggacgcgctctgggctcaggcctactgcgacagcga                                                                                             <  1:127930‑M1/130‑58 (MQ=255)                                                                       ccAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGgcgcagcatcctgcacccggaggacgcgctctgggctcaggcctactgcgacagcga                                                                                             >  2:127930‑M1/1‑73 (MQ=255)                                                                       ccAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt                                                                         >  2:217923/1‑150 (MQ=255)                                                                       caaaagGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt                                                                         >  1:217719/5‑150 (MQ=255)                                                                          gagGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCaa                                                                      <  1:217923/150‑1 (MQ=255)                                                                           agGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAAt                                                                     <  2:286117/150‑1 (MQ=255)                                                                                       tCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGgcgcagcatcctgcacccggaggacgcgctctgggctcaggcctactgcgacagcgaga                                                                                           <  2:13005‑M1/116‑60 (MQ=255)                                                                                       tCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGgcgcagcatcctgcacccggaggacgcgctctgggctcaggcctactgcgacagcgaga                                                                                           >  1:13005‑M1/1‑57 (MQ=255)                                                                                                             ccAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGaaa                                   <  2:278393/150‑1 (MQ=255)                                                                                                                        tCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAg                        <  2:209570/150‑1 (MQ=255)                                                                                                                          gcgcCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGCTGGACCGTCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGt                      <  1:256069/150‑1 (MQ=255)                                                                                                                                        tctcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctga                                          <  2:13005‑M2/116‑58 (MQ=255)                                                                                                                                        tctcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctga                                          >  1:13005‑M2/1‑59 (MQ=255)                                                                                                                                          tcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctgacggtcagcccctctgg                          >  2:127930‑M2/1‑57 (MQ=255)                                                                                                                                          tcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctgacggtcagcccctctgg                          <  1:127930‑M2/130‑74 (MQ=255)                                                                                                                                              tGgcgcagcatcctgcacccggaggacgcgctctgggctcaggcctactgcgacagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctgacggtcagcccctctgggtacgcaatatcgtcagcatgatc  <  2:256069‑M1/150‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                     TGATGTCGATCATCAGCCCGCGCATCACTGGCTGGTGGCCGTGCTCGATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTT  >  NC_002947/469693‑469983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.