New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 469835	15 (1.150)	4 (0.310)	4/268	1.1	21.8%	coding (1125/3744 nt)	PP_0386	sensory box protein
	?	NC_002947	= 469886	14 (1.100)					coding (1074/3744 nt)	PP_0386	sensory box protein

GATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCAGGCGATGGCTGACAGGCTCTCGAC  >  NC_002947/469739‑470011                                                                                                                                                    |                                                                                                                              gATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCca                                                                                                                             <  2:256069‑M2/150‑3 (MQ=255)     aggCTGACGATGTTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCGGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGaaa                                                                                                                         <  2:296557/148‑1 (MQ=255)             gATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCt                                                                                                                 >  1:280063/1‑150 (MQ=255)                   gCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGTGCCCCGCTGCGGTCTCGTTGTCGCAGTAGGCCTGAGCGCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCa                                                                                                           <  1:58171/150‑1 (MQ=255)                         ccAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt                                                                                                     >  2:217923/1‑150 (MQ=255)                         caaaagGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACt                                                                                                     >  1:217719/5‑150 (MQ=255)                            gagGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCaa                                                                                                  <  1:217923/150‑1 (MQ=255)                             agGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAAt                                                                                                 <  2:286117/150‑1 (MQ=255)                                                               ccAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGaaa                                                               <  2:278393/150‑1 (MQ=255)                                                                          tCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAg                                                    <  2:209570/150‑1 (MQ=255)                                                                            gcgcCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGCTGGACCGTCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGt                                                  <  1:256069/150‑1 (MQ=255)                                                                                          tctcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctga                                                                      >  1:13005‑M2/1‑59 (MQ=255)                                                                                          tctcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctga                                                                      <  2:13005‑M2/116‑58 (MQ=255)                                                                                            tcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctgacggtcagcccctctgg                                                      >  2:127930‑M2/1‑57 (MQ=255)                                                                                            tcGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCcagcgagaccgcagcggggcgcgaccacagcctggactaccgggtgatccgggctgacggtcagcccctctgg                                                      <  1:127930‑M2/130‑74 (MQ=255)                                                                                                    gCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCa                          >  2:284473/1‑150 (MQ=255)                                                                                                             cTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCACCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCAGGCGATGGc                 >  2:181965/1‑150 (MQ=255)                                                                                                                   ccAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCAGGCGATGGCTGACAg           <  1:284473/150‑1 (MQ=255)                                                                                                                            gTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCAGGCGATGGCTGACAGGCTCTCGAc  >  1:144761/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                              GATCATGCTGACGATATTGCGTACCCAGAGGGGCTGACCGTCAGCCCGGATCACCCGGTAGTCCAGGCTGTGGTCGCGCCCCGCTGCGGTCTCGCTGTCGCAGTAGGCCTGAGCCCAGAGCGCGTCCTCCGGGTGCAGGATGCTGCGCCAGAAACCGGGCCTGAGCCAGTCACTCAATGGGTAGCCAAGCAGGTCTTCGGCATGGGGTGAAACGTAGCTGTAGGTGAAGTCGTTGGCATCGGCTTCCCAGGCGATGGCTGACAGGCTCTCGAC  >  NC_002947/469739‑470011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.