New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2060084 | 14 (1.070) | 4 (0.320) | 4/266 | 1.1 | 21.9% | coding (588/939 nt) | PP_1836 | ZIP family metal transporter |
? | NC_002947 | = 2060113 | 15 (1.180) | coding (559/939 nt) | PP_1836 | ZIP family metal transporter |
GCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2059932‑2060084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTG < NC_002947/2060113‑2059967 GCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTC < 2:273930/150‑1 CATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGGCGATTGGCGT > 1:168247/1‑150 GGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGG < 2:168247/150‑1 AAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACAT < 1:103996/127‑1 AAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGGCGATTGGCGTGAGCTTTGCCAATGGCGACAT > 2:103996/1‑127 ATGGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTG < 1:134832/150‑1 GCCCCTAGCGGCTCCATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2059932‑2060084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgGCGATTGGCGTGAGCTTTGCCAATGGCGACATGAACATCGGCCTGCCGCTGACCAGTGCCATCGCCATCCAGGACATCCCCGAGGGGCTGGCCGTGGCACTGGCCTTGCGCGCCACCGGGCTTTCTAACCTGAAGGCCGCGTTGGTG < NC_002947/2060113‑2059967 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |