| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2060084 | 14 (1.070) | 4 (0.320) | 4/266 | 1.1 | 21.9% | coding (588/939 nt) | PP_1836 | ZIP family metal transporter |
| ? | NC_002947 | = 2060113 | 15 (1.180) | coding (559/939 nt) | PP_1836 | ZIP family metal transporter | |||||
CATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCGG > NC_002947/2059946‑2060231 | cATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGgcgattggcgt > 1:168247‑M1/1‑139 (MQ=255) ccGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCa < 1:284489/150‑1 (MQ=255) caccaACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCcat < 1:134832‑M2/150‑4 (MQ=255) ggCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGgcgattggcgtgagctttgccaatggcgacatgaacatcgg < 2:168247‑M1/150‑42 (MQ=255) ttCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTcaggcagg > 2:242646/1‑150 (MQ=255) ttCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTcaggcagg > 1:178249/1‑150 (MQ=255) aaaGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGgcgattggcgtgagctttgccaatggcgacat < 1:103996‑M1/127‑33 (MQ=255) aaaGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGgcgattggcgtgagctttgccaatggcgacat > 2:103996‑M1/1‑95 (MQ=255) aaGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGt < 2:305746/150‑1 (MQ=255) ccGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATc < 2:134832/150‑1 (MQ=255) ggTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGc < 2:277138/150‑1 (MQ=255) gcAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACaa > 2:124951/1‑150 (MQ=255) aaGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAAc < 1:150680/150‑1 (MQ=255) gATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGGATTGACTTGACGTTTGCTCTTCCGATCTAACTCCAGGACAAACAGCCACACCCGGCTGATGCGCTCGGCTTc < 1:242646/150‑1 (MQ=255) tCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCCTCGGGCCCGCACGGGCCGGTGCTTTCgt < 2:178249/150‑1 (MQ=255) aGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCg > 1:201074/1‑43 (MQ=255) aGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCg < 2:201074/43‑1 (MQ=255) ccGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggctttctaacctgaaggcc < 2:168247‑M2/150‑110 (MQ=255) ttCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAg > 2:1056/1‑150 (MQ=255) aTGgcgattggcgtgagctttgccaatggcgacatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggctttctaacctgaaggccgcgttggtg < 1:134832‑M1/150‑148 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggcttt > 2:103996‑M2/1‑32 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggcttt < 1:103996‑M2/127‑96 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCgg < 1:1056/150‑1 (MQ=255) | CATCAGGCCCGACCCTATCGCCACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCGG > NC_002947/2059946‑2060231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |