New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2060084 | 14 (1.070) | 4 (0.320) | 4/266 | 1.1 | 21.9% | coding (588/939 nt) | PP_1836 | ZIP family metal transporter |
? | NC_002947 | = 2060113 | 15 (1.180) | coding (559/939 nt) | PP_1836 | ZIP family metal transporter |
CACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCGGTCCAGGCCCAGCATCAGCAGC > NC_002947/2059967‑2060252 | caccaACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCcat < 1:134832‑M2/150‑4 (MQ=255) ttCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTcaggcagg > 1:178249/1‑150 (MQ=255) ttCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTcaggcagg > 2:242646/1‑150 (MQ=255) aaGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGt < 2:305746/150‑1 (MQ=255) ccGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATc < 2:134832/150‑1 (MQ=255) ggTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGc < 2:277138/150‑1 (MQ=255) gcAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACaa > 2:124951/1‑150 (MQ=255) aaGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAAc < 1:150680/150‑1 (MQ=255) gATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGGATTGACTTGACGTTTGCTCTTCCGATCTAACTCCAGGACAAACAGCCACACCCGGCTGATGCGCTCGGCTTc < 1:242646/150‑1 (MQ=255) tCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCCTCGGGCCCGCACGGGCCGGTGCTTTCgt < 2:178249/150‑1 (MQ=255) ccGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggctttctaacctgaaggcc < 2:168247‑M2/150‑110 (MQ=255) ttCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAg > 2:1056/1‑150 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggcttt < 1:103996‑M2/127‑96 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggcttt > 2:103996‑M2/1‑32 (MQ=255) aTGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCgg < 1:1056/150‑1 (MQ=255) ggCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCTCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGGTCAGGCGGGGGGAAGCGGTCCAGGCCCAg > 2:65878/1‑150 (MQ=255) aCGCCAATCGCcatgaacatcggcctgccgctgaccagtgccatcgccatccaggacatccccgaggggctggccgtggcactggccttgcgcgccaccgggctttctaacctgaaggccgcgttggtggcgatagggtcgggcctgatg > 1:168247‑M2/1‑11 (MQ=255) aCGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCGGTCCAGGCCCAGCATCagcagc > 2:181940/1‑150 (MQ=255) cGCCAATCGCCATGCCTTCAGGCAGGTTGTGGAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGAGGTGAAGCGGTCCAgg < 2:189883/134‑1 (MQ=255) cGCCAATCGCCATGCCTTCAGGCAGGTTGTGGAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGAGGTGAAGCGGTCCAgg > 1:189883/1‑134 (MQ=255) | CACCAACGCGGCCTTCAGGTTAGAAAGCCCGGTGGCGCGCAAGGCCAGTGCCACGGCCAGCCCCTCGGGGATGTCCTGGATGGCGATGGCACTGGTCAGCGGCAGGCCGATGTTCATGTCGCCATTGGCAAAGCTCACGCCAATCGCCATGCCTTCAGGCAGGTTGTGCAGGGTGATCGCCAGCACAAACAGCCACACCCGGCTGATGCGCTCGGCTTCGGGCCCGCACGGGCCGGTGCTTTCGTGTTCATGCGGGGTGAAGCGGTCCAGGCCCAGCATCAGCAGC > NC_002947/2059967‑2060252 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |