New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2247118 =	7 (0.540)	3 (0.240)	3/262	1.3	26.4%	coding (2524/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
	?	NC_002947	2247154 =	10 (0.800)					coding (2488/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

CCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2247153‑2247118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGG  >  NC_002947/2247154‑2247299                                                                                                                                                                                        CCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCA                                  >  2:141925/1‑150  CATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGG                                                                                                     >  1:5991/1‑82  CATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGG                                                                                                     <  2:5991/82‑1                                 ATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGG  <  1:141925/150‑1                                                                                                                                                                                        CCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2247153‑2247118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGG  >  NC_002947/2247154‑2247299

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.