| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5180858 | 12 (0.920) | 5 (0.390) | 5/272 | 1.0 | 29.5% | coding (177/537 nt) | def‑II | peptide deformylase |
| ? | NC_002947 | = 5180880 | 12 (0.930) | coding (155/537 nt) | def‑II | peptide deformylase | |||||
CCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5180735‑5180858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG < NC_002947/5180880‑5180736 CCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAGTTG < 1:127972/150‑1 CACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAGTTGG > 1:212875/1‑82 CACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAGTTGG < 2:212875/82‑1 TCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCG > 2:258430/1‑150 CCAACTGCAGGTCGATGCCGACCTGCGGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG < 1:258430/150‑1 CCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5180735‑5180858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAGGTCGGCATCGACCTGCAGTTGGTGATCTTCGGCTTCGAGCGCAGCGAGCGATACCCCGATGCCGAGGCGGTGCCGCAGACCATTTTGCTGAATCCGGTCATCACCCCGACCTCCAGCGAGGTCGAGGACGGCTGGGAGGG < NC_002947/5180880‑5180736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |