New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5180858	12 (0.920)	5 (0.390)	5/272	1.0	29.5%	coding (177/537 nt)	def‑II	peptide deformylase
	?	NC_002947	= 5180880	12 (0.930)					coding (155/537 nt)	def‑II	peptide deformylase

GACAGACACCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTC  >  NC_002947/5180727‑5181004                                                                                                                                    |                                                                                                                                                   gacagacaCCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGAcc                                                                                                                                  >  1:121587/1‑150 (MQ=255)     gacaCCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCg                                                                                                                              <  1:61391/150‑1 (MQ=255)         ccccTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACcgcaggtcggcatcgacctgcagttg                                                                                                                          <  1:127972‑M1/150‑27 (MQ=255)          cccTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGggcg                                                                                                                         >  2:187928/1‑150 (MQ=255)          cccTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAgttgg                                                                                                                         <  1:258430‑M2/150‑6 (MQ=255)                          cGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAgttggtgatcttcggcttcga                                                                                                         >  2:258430‑M2/1‑129 (MQ=255)                            aCCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACAccgccg                                                                                                       >  2:86729/1‑150 (MQ=255)                                              gTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGACATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCa                                                                                             >  2:161390/1‑142 (MQ=255)                                              gTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGACATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCa                                                                                             <  1:161390/142‑1 (MQ=255)                                                        gATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCTAGAGACCTGTTTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATgtcgt                                                                           <  2:168028/150‑1 (MQ=255)                                                             aGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATc                                                                      >  2:206310/1‑150 (MQ=255)                                                                              cACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACcgcaggtcggcatcgacctgcagttgg                                                                                                                         >  1:212875‑M1/1‑55 (MQ=255)                                                                              cACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACcgcaggtcggcatcgacctgcagttgg                                                                                                                         <  2:212875‑M1/82‑28 (MQ=255)                                                                                ccGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCAc                                                   >  1:264754/1‑150 (MQ=255)                                                                                       ggCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAg                                            >  1:249528/1‑150 (MQ=255)                                                                                          aTCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCAt                                         <  1:206310/150‑1 (MQ=255)                                                                                                                tCGAAGCCGAAGATCACCAACtgcaggtcgatgccgacctgcggttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtgccgcagaccattttgctgaatccggtcatcaccccgacctccagcgaggtcg                   >  2:258430‑M1/1‑21 (MQ=255)                                                                                                                        gAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCgcag           >  1:265122/1‑150 (MQ=255)                                                                                                                                ccAACtgcaggtcgatgccgacctgcggttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtgccgcagaccattttgctgaatccggtcatcaccccgacctccagcgaggtcgaggacggctgggaggg   <  1:258430‑M1/150‑146 (MQ=255)                                                                                                                                ccAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtg                                                                       >  1:212875‑M2/1‑27 (MQ=255)                                                                                                                                ccAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtg                                                                       <  2:212875‑M2/82‑56 (MQ=255)                                                                                                                                 cAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtgccgcagaccattttgctgaatccggtcatcaccccgacctccagcgaggtcgaggacggctgggagggg  <  1:127972‑M2/150‑125 (MQ=255)                                                                                                                                    |                                                                                                                                                   GACAGACACCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTC  >  NC_002947/5180727‑5181004

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.