New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5180858	12 (0.920)	5 (0.390)	5/272	1.0	29.5%	coding (177/537 nt)	def‑II	peptide deformylase
	?	NC_002947	= 5180880	12 (0.930)					coding (155/537 nt)	def‑II	peptide deformylase

GACACCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTCGTCGCCCATCTTGA  >  NC_002947/5180731‑5181018                                                                                                                                                      |                                                                                                                                           gacaCCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCg                                                                                                                                            <  1:61391/150‑1 (MQ=255)      cccTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGggcg                                                                                                                                       >  2:187928/1‑150 (MQ=255)      cccTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAgttgg                                                                                                                                       <  1:258430‑M2/150‑6 (MQ=255)                      cGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACCGCAGGTCGGCATCGACCTGCAgttggtgatcttcggcttcga                                                                                                                       >  2:258430‑M2/1‑129 (MQ=255)                        aCCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACAccgccg                                                                                                                     >  2:86729/1‑150 (MQ=255)                                          gTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGACATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCa                                                                                                           <  1:161390/142‑1 (MQ=255)                                          gTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGACATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCa                                                                                                           >  2:161390/1‑142 (MQ=255)                                                    gATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCTAGAGACCTGTTTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATgtcgt                                                                                         <  2:168028/150‑1 (MQ=255)                                                         aGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATc                                                                                    >  2:206310/1‑150 (MQ=255)                                                                            ccGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCAc                                                                 >  1:264754/1‑150 (MQ=255)                                                                                   ggCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAg                                                          >  1:249528/1‑150 (MQ=255)                                                                                      aTCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCAt                                                       <  1:206310/150‑1 (MQ=255)                                                                                                                    gAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCgcag                         >  1:265122/1‑150 (MQ=255)                                                                                                                            ccAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtg                                                                                     >  1:212875‑M2/1‑27 (MQ=255)                                                                                                                            ccAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtg                                                                                     <  2:212875‑M2/82‑56 (MQ=255)                                                                                                                             cAACTGCAGGTCGATGCCGACCTGCGgttggtgatcttcggcttcgagcgcagcgagcgataccccgatgccgaggcggtgccgcagaccattttgctgaatccggtcatcaccccgacctccagcgaggtcgaggacggctgggagggg                <  1:127972‑M2/150‑125 (MQ=255)                                                                                                                                  gCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCTGATCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTCGTCGc           >  1:225805/1‑150 (MQ=255)                                                                                                                                           tGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTCGTCGCCCATCTTga  >  1:289647/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                           GACACCCCTCCCAGCCGTCCTCGACCTCGCTGGAGGTCGGGGTGATGACCGGATTCAGCAAAATGGTCTGCGGCACCGCCTCGGCATCGGGGTATCGCTCGCTGCGCTCGAAGCCGAAGATCACCAACTGCAGGTCGATGCCGACCTGCGGGGCGGCCAGGCCCACACCGCCGACGTGACGCATGGTTTCGAACATGTCGTCGATCAGTTGCTGCAGTTCGGCACTGCCAAGCATGTGCTCGGGCACTGGCGGAGCGATGCGCAGCAGGCGTTCGTCGCCCATCTTGA  >  NC_002947/5180731‑5181018

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.