New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5257895 =	12 (0.920)	5 (0.410)	4/256	1.1	24.9%	intergenic (‑46/+98)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase
	?	NC_002947	5257986 =	19 (1.560)					intergenic (‑137/+7)	PP_4634/PP_4635	alpha/beta family hydrolase/trans‑2‑enoyl‑CoA reductase

TTGACTACGACAAAGACGTGGCCACCGATGTGAAGTTCGACTGCGTCGAGCTGTAATCGGGTAAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5258048‑5257895 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacaggctTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAGGTTCTCGGTG  >  NC_002947/5257986‑5258131                                                                                                                                                                                                                                                                                                              TTGACTACGACAAAGACGTGGCCACCGATGTGAAGTTCGACTGCGTCGAGCTGTAATCGGGTAAGCCTGTACCGGCCTCTTCGCGGGCAAGCCAGCTCCCACAGGTTCTCCCCCTGTAGGAGCGAGTTCACCCGCGAAGAGGCCAGTACA                                                                                                                                                        >  1:205397/1‑150   GACTACGACAAAGACGTGGCCACCGATGTGAAGTTCGACTGCGTCGAGCTGTAATCGGGTAAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGG                                                                                                                                                      <  1:290790/150‑1                                                                   CTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAG                                                                                         <  1:13728/147‑1                                                                   CTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAG                                                                                         >  2:13728/1‑147                                                                             CTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCA                                                                                <  1:279247/146‑1                                                                             CTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCA                                                                                >  2:279247/1‑146                                                                                                     ACAGGTTCTCCCCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGA                                                    >  2:162751/1‑150                                                                                                                                                       GGCTTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAGGTTCTCGGTG  <  1:162751/150‑1                                                                                                                                                                                                                                                                                                              TTGACTACGACAAAGACGTGGCCACCGATGTGAAGTTCGACTGCGTCGAGCTGTAATCGGGTAAGCCTGTACCGGCCTCTTCGCGGGCAAGCCCGCTCCCACAGGTTCTCCCCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCAGTACAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5258048‑5257895 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacaggctTACCCGATTACAGCTCGACGCAGTCGAACTTCACATCGGTGGCCACGTCTTTGTCGTAGTCAACGTCAGCGCGCTCGAAGCCGAACAGGTTGAGGAACTGCTTCTTGTAACCGGCGTAGTCAGTCAGCTCGAACAGGTTCTCGGTG  >  NC_002947/5257986‑5258131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.