New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5111564 =	17 (1.300)	4 (0.320)	4/260	1.1	21.0%	coding (896/1068 nt)	rluB	23S rRNA pseudouridylate synthase B
	?	NC_002947	5111604 =	14 (1.130)					coding (856/1068 nt)	rluB	23S rRNA pseudouridylate synthase B

CACGGCCTGCCGGCTTGTCGCCATCAGGTTTGCCCGGACGCTTGCGCATCTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTC  >  NC_002947/5111415‑5111709                                                                                                                                                      |                                                                                                                                                  cctgccgatgggccgctggcgcgaaatgacccagggcgaaatcgacatcctcgccgccgaagtgggcctgcagccggtcgcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgct                                                                                                                                                   <  2:119989‑M1/1‑1 (MQ=255)  ccGGCCTGCCGGCTTGTCGCCATCAGGTTTGCCCGGACGCTTGCGCATCTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTg                                                                                                                                                  <  2:174249/149‑1 (MQ=255)             ccgctggcgcgaaatgacccagggcgaaatcgacatcctcgccgccgaagtgggcctgcagccggtcgcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCa                                                                                                                                       <  1:207626‑M1/13‑1 (MQ=255)                       aTCAGGTTTGCCCGGACGCTTGCGCATCTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCAc                                                                                                                             <  2:25246/150‑1 (MQ=255)                                      gaaatcgacatcctcgccgccgaagtgggcctgcagccggtcgcgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGcc                                                                                                              >  2:207626‑M1/113‑150 (MQ=255)                                       cGCTTGCGCATCTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGccc                                                                                                             <  2:50027/150‑1 (MQ=255)                                                  ctcgctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGt                                                                                                  >  1:49691/1‑150 (MQ=255)                                                     gctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCggg                                                                                                                                           >  1:170347/1‑106 (MQ=255)                                                     gctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCggg                                                                                                                                           <  2:170347/106‑1 (MQ=255)                                                     gctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGa                                                                                               >  1:69191/1‑150 (MQ=255)                                                                  gCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAgg                                                                                  <  2:202364/150‑1 (MQ=255)                                                                                aCGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTc                                                                    >  2:250086/1‑150 (MQ=255)                                                                                 cgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTgg                                                                                                                                                 >  2:11166‑M1/70‑72 (MQ=255)                                                                                 cgctgccagccatgaagctcaaggccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTgg                                                                                                                                                 <  1:11166‑M1/3‑1 (MQ=255)                                                                                                     ttcttcACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCAtggc                                               >  1:233313/1‑150 (MQ=255)                                                                                                        ttcACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCAtggctgg                                            <  2:69191/150‑1 (MQ=255)                                                                                                        gccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAgcgggcgg                                                                                                    <  2:171613‑M1/48‑1 (MQ=255)                                                                                                        gccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAgcgggcgg                                                                                                    >  1:171613‑M1/47‑94 (MQ=255)                                                                                                           aCGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAg                                         >  2:203317/1‑150 (MQ=255)                                                                                                                      gcgcCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCAc                                                                                                                  >  1:219/1‑66 (MQ=255)                                                                                                                      gcgcCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCAc                                                                                                                  <  2:219/66‑1 (MQ=255)                                                                                                                      gcgcCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCt                              <  1:211186/150‑1 (MQ=255)                                                                                                                                                 cTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGt   >  2:102958/1‑150 (MQ=255)                                                                                                                                                  ttCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTc  >  2:80842/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CACGGCCTGCCGGCTTGTCGCCATCAGGTTTGCCCGGACGCTTGCGCATCTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTC  >  NC_002947/5111415‑5111709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.