| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5111564 = | 17 (1.300) | 4 (0.320) | 4/260 | 1.1 | 21.0% | coding (896/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B |
| ? | NC_002947 | 5111604 = | 14 (1.130) | coding (856/1068 nt) | rluB | 23S rRNA pseudouridylate synthase B | |||||
CTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTCGCGCCAGCGGCCCATCGGCAGG > NC_002947/5111464‑5111752 | ctcgctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGt > 1:49691/1‑150 (MQ=255) gctcgGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGa > 1:69191/1‑150 (MQ=255) gCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAgg < 2:202364/150‑1 (MQ=255) aCGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTc > 2:250086/1‑150 (MQ=255) ttcttcACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCAtggc > 1:233313/1‑150 (MQ=255) ttcACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCAtggctgg < 2:69191/150‑1 (MQ=255) gccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAgcgggcgg > 1:171613‑M1/47‑94 (MQ=255) gccaaggacaagatggagcgcctgcagcgcaagtcgacccgcccgcTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAgcgggcgg < 2:171613‑M1/48‑1 (MQ=255) aCGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAg > 2:203317/1‑150 (MQ=255) gcgcCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCt < 1:211186/150‑1 (MQ=255) ccgcccgctgggccgtggcgagcgcgtgcgcaacctgcgcccggcccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGc > 1:171613‑M2/49‑94 (MQ=255) ccgcccgctgggccgtggcgagcgcgtgcgcaacctgcgcccggcccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGc < 2:171613‑M2/46‑1 (MQ=255) cTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGt > 2:102958/1‑150 (MQ=255) ttCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTc > 2:80842/1‑150 (MQ=255) ggccgtggcgagcgcgtgcgcaacctgcgcccggcccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTc > 2:207626‑M2/39‑150 (MQ=255) GGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTc < 1:186000‑M1/150‑1 (MQ=255) cgcAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTgg < 1:203317/150‑1 (MQ=255) gcAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTggg < 1:250086/150‑1 (MQ=255) gcgcACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTc < 2:233313/150‑1 (MQ=255) gcACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTcgc > 1:222404/1‑150 (MQ=255) tgcgcccggcccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTCGCGCCAGCgg < 1:207626‑M2/137‑1 (MQ=255) ccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAgcg > 2:11166‑M2/4‑72 (MQ=255) ccaGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAgcg < 1:11166‑M2/69‑1 (MQ=255) aGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTCGCGCCAGCGGCCCATCGGCAgg < 2:119989‑M2/149‑1 (MQ=255) | CTCGCTCGGGCGCTCAGCCACCGTGCTGCCACGGGTGGGTTTGCGCGGCGCTTCTTCACGCGGCTGACGCGCCGGGCGTTCGCCAGTAGCGGCACCTTCGTGGGCCGGGCGCAGGTTGCGCACGCGCTCGCCACGGCCCAGCGGGCGGGTCGACTTGCGCTGCAGGCGCTCCATCTTGTCCTTGGCCTTGAGCTTCATGGCTGGCAGCGCGACCGGCTGCAGGCCCACTTCGGCGGCGAGGATGTCGATTTCGCCCTGGGTCATTTCGCGCCAGCGGCCCATCGGCAGG > NC_002947/5111464‑5111752 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |