New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	337784 =	58 (1.330)	15 (0.440)	14/208	1.6	29.5%	intergenic (‑31/+98)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease
	?	NC_002947	337868 =	26 (0.750)					intergenic (‑115/+14)	PP_0279/PP_0280	hypothetical protein/amino acid ABC transporter permease

AGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAA  >  NC_002947/337636‑337932                                                                                                                                                     |                                                                                                                                                     caccagccTGCA‑GCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCtt                                                                                                                                                    >  2:531407/8‑150 (MQ=255)    ccAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTcg                                                                                                                                                  >  2:966850/1‑150 (MQ=255)     cAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTcgc                                                                                                                                                 >  1:577666/1‑150 (MQ=255)      cgcacctacctgccggtggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgcgtgtgctatgcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTcgcg                                                                                                                                                >  1:465924‑M1/144‑150 (MQ=255)       gCTGCAGGCTGGTGAAGTTGCGCTGGTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGCCTCTCAAGCGGGTGCTTAGGTGGGCGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCgg                                                                                                                                               <  1:68465/150‑1 (MQ=255)       gCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAACTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCgg                                                                                                                                               >  1:2778/1‑150 (MQ=255)        cTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCggg                                                                                                                                              <  1:861687/150‑1 (MQ=255)         tGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGTTCGATCAGGAACTGGTAGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGGTGTGTGGTTGTTTTGAGGGCCTCTTCGCGGGc                                                                                                                                             >  1:897177/1‑150 (MQ=255)               cTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAAGGCCTCTTCGCGGGCACGccc                                                                                                                                       <  1:33473/150‑1 (MQ=255)                    gAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGCTGGTTTTGAGCGCCTCTTCGCGGGCACGCCCGCTcc                                                                                                                                  <  1:365711/150‑1 (MQ=255)                      tggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCca                                                                                                                                >  1:83518‑M1/128‑150 (MQ=255)                      tggaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCca                                                                                                                                <  2:431994‑M1/23‑1 (MQ=255)                      tggaaatcttcttcgccaaaggcgtggtctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCca                                                                                                                                >  2:529043‑M1/128‑150 (MQ=255)                        gaaatcttcttcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCcaca                                                                                                                              >  1:224486‑M1/126‑150 (MQ=255)                         ggCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                             <  2:577666/150‑1 (MQ=255)                          gcgcGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                            >  2:5667/1‑150 (MQ=255)                          gcgcGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAgg                                                                                                                            >  1:642766/1‑150 (MQ=255)                                  tcgccgcaggcgtgttctacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAgcgc                                                                                                                    <  1:1079545‑M1/35‑1 (MQ=255)                                  tCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAgcgc                                                                                                                    <  1:484208/150‑1 (MQ=255)                                     acaGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCcaa                                                                                                                 >  1:217442/1‑149 (MQ=255)                                       aGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACAt                                                                                                               >  1:173083/1‑150 (MQ=255)                                                tGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCgg                                                                                                                                               >  1:455070/1‑109 (MQ=255)                                                tGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCgg                                                                                                                                               <  2:455070/109‑1 (MQ=255)                                                 gCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                           >  2:701518/1‑128 (MQ=255)                                                 gCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                           <  1:701518/128‑1 (MQ=255)                                                  cTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                           >  1:515371/1‑127 (MQ=255)                                                  cTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGt                                                                                                                           <  2:515371/127‑1 (MQ=255)                                                  cTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCcaacctt                                                                                                             <  1:904777/141‑6 (MQ=255)                                                  cTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGTAGCGCcaacctt                                                                                                             >  2:904777/1‑136 (MQ=255)                                                  cTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGgc                                                                                                    <  2:173083/150‑1 (MQ=255)                                                   tacctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGgcg                                                                                                   <  1:591013‑M1/52‑1 (MQ=255)                                                    acctggtgatctcgttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGgcgc                                                                                                  >  2:591013‑M1/98‑150 (MQ=255)                                                      aTCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCCCGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTa                                                                                                <  1:531407/150‑1 (MQ=255)                                                      aTCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGta                                                                                                                          <  1:680997/124‑1 (MQ=255)                                                      aTCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGta                                                                                                                          >  2:680997/1‑124 (MQ=255)                                                      aTCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTa                                                                                                >  2:899744/1‑150 (MQ=255)                                                         aGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTacac                                                                                             >  2:376583/1‑150 (MQ=255)                                                           gAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                                                                <  2:325795/113‑1 (MQ=255)                                                           gAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                                                                >  1:325795/1‑113 (MQ=255)                                                           gAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCt                                                                                           >  1:667544/1‑150 (MQ=255)                                                            aaCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtg                                                                                          <  2:172180/150‑1 (MQ=255)                                                             aCTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         <  1:5667/150‑1 (MQ=255)                                                               tGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCACAACATTCAAGGTTGGCGCTACACCTGTgg                                                                                       <  1:750400/150‑1 (MQ=255)                                                                 gttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACAcc                                                                                            >  1:200877‑M1/85‑143 (MQ=255)                                                                 gttcatgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACAcc                                                                                            <  2:200877‑M1/59‑1 (MQ=255)                                                                 gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTc                                                                                                                                                   >  1:925025/1‑88 (MQ=255)                                                                 gTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTc                                                                                                                                                   <  2:925025/88‑1 (MQ=255)                                                                   cGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGc                                                                                   >  1:632551/1‑150 (MQ=255)                                                                     aGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCgg                                                                                 <  1:899744/150‑1 (MQ=255)                                                                     aGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCgg                                                                                 <  1:966850/150‑1 (MQ=255)                                                                     aGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCgg                                                                                 <  2:632551/150‑1 (MQ=255)                                                                      tgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTcgcg                                                                                                                                                <  1:214609‑M1/7‑1 (MQ=255)                                                                      tgctggtgcaaggcttcaagctgctggagcgctggttgcgcgtggatgcctgccaaggccgctgagacctcactgactgCTTcgcg                                                                                                                                                >  2:214609‑M1/80‑86 (MQ=255)                                                                         ccTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGt                                                                             <  2:667544/150‑1 (MQ=255)                                                                            ggAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGcc                                                                          <  2:2778/150‑1 (MQ=255)                                                                             gAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGccc                                                                         >  1:543313/1‑150 (MQ=255)                                                                               aGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCggg                                                                                <  2:822848/141‑1 (MQ=255)                                                                               aGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCggg                                                                                >  1:822848/1‑141 (MQ=255)                                                                                           ggTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGGGGCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtcagg                                                           >  1:36650/1‑149 (MQ=255)                                                                                               ggggCTGTGGAGGTGGTTGGGCATGGTAAGGATGTGTGGTCGTTTTGAGCCCCGCTTCGCGCGCACGCCCGCTCTCACAGGTATAGCGCCACTTTCAAGGTTTGCGCCACACCTGTGGGGGCGGGCGTGCCCGCGAAGCAGTCAGTGAgg                                                       <  2:897177/150‑1 (MQ=37)                                                                                                                tGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTggca                                      <  2:543313/150‑1 (MQ=255)                                                                                                                     aTGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCTCCTTCAAGGTTGGCGCTACACCTGTGGGAGCGGGGGTGCCGGCGAAGCAGTCAGTGAGGTCTCAGCGGACTTGGCAGGCAt                                 >  2:738547/1‑150 (MQ=38)                                                                                                                       ctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         >  1:861093‑M1/31‑92 (MQ=255)                                                                                                                       ctgccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         <  2:861093‑M1/62‑1 (MQ=255)                                                                                                                          ccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTgg                                                                                       >  2:558537‑M1/28‑91 (MQ=255)                                                                                                                          ccaaggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTgg                                                                                       <  1:558537‑M1/64‑1 (MQ=255)                                                                                                                             aggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         >  1:320346‑M1/25‑86 (MQ=255)                                                                                                                             aggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         <  2:320346‑M1/62‑1 (MQ=255)                                                                                                                             aggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         >  2:1047585‑M1/25‑86 (MQ=255)                                                                                                                             aggccgctgagacctcactgactgCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCtgt                                                                                         <  1:1047585‑M1/62‑1 (MQ=255)                                                                                                                                     gtggtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAgcg                 >  1:777516/1‑150 (MQ=255)                                                                                                                                      tggtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGAATCCACGCGCAACCAgcgc                >  1:659585/1‑150 (MQ=255)                                                                                                                                      tggtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGAATCCACGCGCAACCAgcac                >  1:659473/1‑148 (MQ=255)                                                                                                                                        gtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtcagt                                                           <  2:1077762/105‑1 (MQ=255)                                                                                                                                        gtTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGcagtcagt                                                           >  1:1077762/1‑105 (MQ=255)                                                                                                                                                 gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCtt     <  2:777516/150‑1 (MQ=255)                                                                                                                                                   tgCTTCGCGGGCACGCCTGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAAc                      >  2:86078‑M1/3‑131 (MQ=255)                                                                                                                                                   tgCTTCGCGGGCACGCCTGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAAc                      <  1:86078‑M1/129‑1 (MQ=255)                                                                                                                                                    tctTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGTGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGaa  <  1:376583/150‑1 (MQ=255)                                                                                                                                                    tctTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGaa  <  2:642766/150‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     AGGCCAGCTGCAGGCTGGTGAAGGGGCGCGGTTTCCACAGCTGCTGGTGCTCGATCAGGAACTGGTCGAGGGCCTGGAAGCGGGTGCTTAGGTGGGGGCTGTGGAGGTGGTTGGGCATGGCAAGGATGTGTGGTGGTTTTGAGGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTATAGCGCCACATTCAAGGTTGGCGCTACACCTGTGGGAGCGGGCGTGCCCGCGAAGCAGTCAGTGAGGTCTCAGCGGCCTTGGCAGGCATCCACGCGCAACCAGCGCTCCAGCAGCTTGAA  >  NC_002947/337636‑337932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.