| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2793794 | 9 (0.340) | 7 (0.330) | 6/218 | 1.8 | 49.7% | intergenic (+60/+67) | PP_2445/PP_2446 | membrane protein/hypothetical protein |
| ? | NC_002947 | = 2793804 | 7 (0.330) | intergenic (+70/+57) | PP_2445/PP_2446 | membrane protein/hypothetical protein | |||||
GCGCCCATGTACCCAAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2793619‑2793794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaagcccgctgcacaggtattcgcgtTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGCCGTCGAGAACGC < NC_002947/2793804‑2793657 GCGCCCATGTACCCAAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGA < 1:7566/150‑1 CCCATGTACCCAAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAA < 2:75264/150‑1 CCAAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGC > 1:480234/1‑150 AAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCAC < 1:198297/150‑1 GGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAG < 2:352828/150‑1 GTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCG > 1:267414/1‑150 GGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGATGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCA > 2:38161/1‑150 GAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGC < 1:350062/118‑1 GAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGC > 2:350062/1‑118 GAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGCGAAT > 1:429108/1‑87 GAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGCGAAT < 2:429108/87‑1 GGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGC < 1:455537/65‑1 GGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGC < 1:455680/65‑1 GGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGC > 2:455680/1‑65 GGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGC > 2:455537/1‑65 ACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGG > 1:153061/1‑137 ACAAGCCCGCTGCACAGGTATTCGCGTTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGG < 2:153061/137‑1 ACAGGTATTCGCGTTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGC > 2:267414/1‑150 ACAGGTATTCGCGTGGCACTG‑GCAACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGC > 1:536259/1‑150 ACAGGTATTCGCG‑TGGCACTGGCAACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCATCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGC > 1:38161/1‑150 GTTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGCCGTCGAGAACGC > 1:542214/1‑150 GCGCCCATGTACCCAAGGGCTATGTGTATGCGGCCATGGCGTTCTCGACGGCTATCGAGGTCCTCAACATCCTGGCCCGTCGAGCGCGTTTGAAGCGTGAGGCGGCTGAAGGTTGATGTAAAAAGGGGCGCCTCGCGCCCCTCTTGCGGACAAGCCCGCTGCACAGGTATTCGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2793619‑2793794‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gacaagcccgctgcacaggtattcgcgtTGCCAGT‑GCCACGCGAATACCTGTGCAGCGGGCTTGTCCGCAAGAGGGGCGCGAGGCGCCCCTTTTTACATCAACCTTCAGCCGCCTCACGCTTCAAACGCGCTCGACGGGCCAGGATGTTGAGGACCTCGATAGCCGTCGAGAACGC < NC_002947/2793804‑2793657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |