New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1299238 =	17 (0.640)	4 (0.160)	4/266	2.9	20.8%	coding (946/1608 nt)	PP_1134	hypothetical protein
	?	NC_002947	1299261 =	14 (0.550)					coding (923/1608 nt)	PP_1134	hypothetical protein

CTCGTTACGCGAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTGCAGCATGCGGAAGGTGTCGCGGGC  >  NC_002947/1299095‑1299385                                                                                                                                                |                                                                                                                                                     cTCGTTACGCGAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑Acc                                                                                                                                               >  1:547738/1‑150 (MQ=255)       aCGCGAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCaaaac                                                                                                                                         <  2:75441/150‑5 (MQ=255)         gcgAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTg                                                                                                                                       <  2:564921/150‑1 (MQ=255)         gcgAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTg                                                                                                                                       >  2:336474/1‑150 (MQ=255)                            gTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATa                                                                                                                          <  1:401380/144‑1 (MQ=255)                            gTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATa                                                                                                                          >  2:401380/1‑144 (MQ=255)                                 cgacgagTCGCCCTGGCTCGCTGGTGGCCGCGCCCACGGTGCCACCCGGACACATCCAGAAGCTGTATACCCAGCGGCCATGCTTGGCGTGGTACACCCGCTTGTAGTCGGCGGC‑CCCCAGTTTTGGCTGGACGGCATACTTGCCCAGGc                                                                                                               >  2:537007/2‑150 (MQ=255)                                     gacTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGc                                                                                                           >  1:159850/1‑150 (MQ=255)                                          gCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAg                                                                                                                 <  1:389905/139‑1 (MQ=255)                                          gCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAg                                                                                                                 >  2:389905/1‑139 (MQ=255)                                             cTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGa                                                                                                   <  2:195515/150‑1 (MQ=255)                                                          ggCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCgg                                                                                      <  1:336474/150‑1 (MQ=255)                                                                       gTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACgg                                                                         <  2:547738/150‑1 (MQ=255)                                                                               cGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCAc                                                                 <  2:204265/150‑1 (MQ=255)                                                                                                       ccgcaaacgctgatcgacaaggcacgcctgggcaagtatgcCGGC‑ACCCAGTTTTGGGTGGcc                                                                                                                                <  2:169913‑M1/22‑1 (MQ=255)                                                                                                       ccgcaaacgctgatcgacaaggcacgcctgggcaagtatgcCGGC‑ACCCAGTTTTGGGTGGcc                                                                                                                                >  1:169913‑M1/42‑63 (MQ=255)                                                                                                                aTTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCttt                                >  1:491489/1‑150 (MQ=255)                                                                                                                      gacaaggcacgcctgggcaagtatgcCGGCCACCCAAAACTGGGTG‑CCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTg                          <  2:290553‑M1/124‑1 (MQ=255)                                                                                                                              acgcctgggcaagtatgcCGGCCACCCAAAACTGGGTG‑CCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTGCAGCATGc                  >  1:290553‑M1/19‑150 (MQ=255)                                                                                                                                   aGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTGCAGCATGCGGagg             <  2:159850/150‑3 (MQ=255)                                                                                                                                              ggcggc‑ACCCAGTTTTGGGTAGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTGCAGCATGCGGAAGGTGTCGCGGgc  >  1:403090/1‑150 (MQ=255)                                                                                                                                                |                                                                                                                                                     CTCGTTACGCGAATACTGGCTCATGCCGTTGGTGACGACTCGCCCTGGCTCGCTGGTGGCCGCGACCACGGTGCCACCCGGACACATGCAGAAGCTGTATACCGAGCGGCCATTCTTGGCGTGGTAAACCAGCTTGTAGTCGGCGGC‑ACCCAGTTTTGGGTGGCCGGCATACTTGCCCAGGCGTGCCTTGTCGATCAGCGTTTGCGGGTGCTCGATACGGAAGCCCACCGAGAACGGTTTGGCTTCCATGTAGACACCTTTGGCGTGCAGCATGCGGAAGGTGTCGCGGGC  >  NC_002947/1299095‑1299385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.