New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5750393 =	15 (0.870)	4 (0.240)	4/268	1.6	20.8%	coding (1226/1455 nt)	thiI	tRNA sulfurtransferase
	?	NC_002947	5750415 =	16 (0.970)					coding (1204/1455 nt)	thiI	tRNA sulfurtransferase

CGTCACCGCATGGAGCACGAAGAAAAGCAGTTCGACATGGCCGTGCTGGAGCGCGCTCTTGAGCGCGCCAAGTTCATTTCCATCGATCATGTGATCGATGAGCTGGGCAAGGACATCGAAATCGAGGAAGTGGCCGAGGCGCTGCC‑AGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5750544‑5750393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCAT  >  NC_002947/5750415‑5750535                                                                                                                                                                                                                                                                                    CGTCACCGCATGGAGCACGAAGAAAAGCAGTTCGACATGGCCGTGCTGGAGCGCGCTCGTGAGCGCGCCAAGTTCATTTCCATCGATCATGTGATCGATGAGCTGGGCAAGGACATCGAAATCGAGGAAGTGGCCGAGGCGCTGCC‑AGGC                                                                                                                             <  2:196884/150‑1                                TCGACATGGCCGTGCTGGAGCGCGCTCTTGAGCGCGCCAAGTTCATTTCCATCGATCATGTGATCGATGAGCTGGGCAAGGACATCGAAATCGAGGAAGTGGCCTGGCAGC‑GCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGC                                                                                              <  2:130283/150‑1                                                                                                                            GAGTAAGTGGCCGAGGCGCTGCC‑AGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCAT  >  1:231190/1‑150                                                                                                                             AGGAAGTGGCCGAGGCGCTGCC‑AGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGG                                                                        <  1:398107/79‑1                                                                                                                             AGGAAGTGGCCGAGGCGCTGCC‑AGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGG                                                                        >  2:398107/1‑79                                                                                                                                                                                                                                                                                    CGTCACCGCATGGAGCACGAAGAAAAGCAGTTCGACATGGCCGTGCTGGAGCGCGCTCTTGAGCGCGCCAAGTTCATTTCCATCGATCATGTGATCGATGAGCTGGGCAAGGACATCGAAATCGAGGAAGTGGCCGAGGCGCTGCC‑AGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5750544‑5750393 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCAT  >  NC_002947/5750415‑5750535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.