| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5750393 = | 15 (0.870) | 4 (0.240) | 4/268 | 1.6 | 20.8% | coding (1226/1455 nt) | thiI | tRNA sulfurtransferase |
| ? | NC_002947 | 5750415 = | 16 (0.970) | coding (1204/1455 nt) | thiI | tRNA sulfurtransferase | |||||
GGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACGCTTGGCATGG > NC_002947/5750272‑5750554 | atggagcacgaagaaaagcagttcgacatggccgtgctggagcgcgctcttgagcgcgccaagttcatttccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTACTc > 1:231190‑M1/122‑150 (MQ=255) gTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGAt < 2:191714/150‑1 (MQ=255) gTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGAt < 1:277262/150‑1 (MQ=255) ttGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGccc > 2:63332/1‑150 (MQ=255) tcgacatggccgtgctggagcgcgctcttgagcgcgccaagttcatttccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagtggcctggcagcgcctcggccaCTTCCTCGATTTCGATGTCCTTGCCCAGc < 2:130283‑M2/29‑1 (MQ=255) gTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTc > 1:259423/1‑150 (MQ=255) tAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATcaca > 2:165183/1‑150 (MQ=255) cTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATgagctg < 1:63332/150‑6 (MQ=255) ttcACCAGAGGTTCGTCTTCCTGTGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAaga < 2:135276/148‑1 (MQ=255) ccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTCCt > 2:398107‑M1/52‑79 (MQ=255) ccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTCCt < 1:398107‑M1/28‑1 (MQ=255) tCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATga < 1:199522/112‑2 (MQ=255) tCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATga > 2:199522/1‑111 (MQ=255) tCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGcc < 1:187452/150‑1 (MQ=255) ggCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTc < 1:165183/150‑1 (MQ=255) gctgggcaaggacatcgaaatcgaggaagTGGCCGAGGC‑GCTGCCAGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGa < 2:130283‑M1/121‑1 (MQ=255) gggTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGAt < 1:75107/95‑1 (MQ=255) gggTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGAt > 2:75107/1‑95 (MQ=255) gagtaagtggccgaggcgctgccaggccaCTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCAt > 1:231190‑M2/30‑150 (MQ=255) aggaagtggccgaggcgctgccaggccaCTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATgg < 1:398107‑M2/51‑1 (MQ=255) aggaagtggccgaggcgctgccaggccaCTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATgg > 2:398107‑M2/29‑79 (MQ=255) GCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCACGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACg < 2:196884‑M1/150‑1 (MQ=255) gcCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACGCTTGGCATgg < 2:259423/150‑1 (MQ=255) cTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACGCtt > 2:259067/1‑141 (MQ=255) cTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACGCtt < 1:259067/141‑1 (MQ=255) | GGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGAACTGCTTTTCTTCGTGCTCCATGCGGTGACGCTTGGCATGG > NC_002947/5750272‑5750554 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |