New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5750393 =	15 (0.870)	4 (0.240)	4/268	1.6	20.8%	coding (1226/1455 nt)	thiI	tRNA sulfurtransferase
	?	NC_002947	5750415 =	16 (0.970)					coding (1204/1455 nt)	thiI	tRNA sulfurtransferase

GCAAGTACTGGCGCGTGGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGA  >  NC_002947/5750256‑5750513                                                                                                                                          |                                                                                                                          gCAAGTACTGGCGCGTGGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAgcg                                                                                                              >  1:178303/1‑150 (MQ=255)     gTACTGGCGCGTGGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTc                                                                                                          <  2:228255/150‑1 (MQ=255)                 atggagcacgaagaaaagcagttcgacatggccgtgctggagcgcgctcttgagcgcgccaagttcatttccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTACTc                                                                                              >  1:231190‑M1/122‑150 (MQ=255)                    gTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGAt                                                                                           <  2:191714/150‑1 (MQ=255)                          gTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGAt                                                                                     <  1:277262/150‑1 (MQ=255)                                    ttGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGccc                                                                           >  2:63332/1‑150 (MQ=255)                                         gTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTc                                                                      >  1:259423/1‑150 (MQ=255)                                                   tAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATcaca                                                            >  2:165183/1‑150 (MQ=255)                                                                 cTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATgagctg                                              <  1:63332/150‑6 (MQ=255)                                                                                    ttcACCAGAGGTTCGTCTTCCTGTGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAaga                           <  2:135276/148‑1 (MQ=255)                                                                                       ccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTCCt                                                                                               <  1:398107‑M1/28‑1 (MQ=255)                                                                                       ccatcgatcatgtgatcgatgagctgggcaaggacatcgaaatcgaggaagTGGCCT‑GGCAGCGCCTCGGCCACTTCCt                                                                                               >  2:398107‑M1/52‑79 (MQ=255)                                                                                                   tCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATga                                                  <  1:199522/112‑2 (MQ=255)                                                                                                   tCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCATGTGATCGATga                                                  >  2:199522/1‑111 (MQ=255)                                                                                                      tCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGcc         <  1:187452/150‑1 (MQ=255)                                                                                                           ggCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTc    <  1:165183/150‑1 (MQ=255)                                                                                                             gctgggcaaggacatcgaaatcgaggaagTGGCCGAGGC‑GCTGCCAGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGa  <  2:130283‑M1/121‑1 (MQ=255)                                                                                                                  gggTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGAt                                                    >  2:75107/1‑95 (MQ=255)                                                                                                                  gggTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGAt                                                    <  1:75107/95‑1 (MQ=255)                                                                                                                                          |                                                                                                                          GCAAGTACTGGCGCGTGGGGTCCAGGTGCTTGAACTTGCTGTTGATGGCGTAGAACGGCATGGCCTGGACTTCGATACCTTCCAGCACCAGAGGTTCGTCTTCCTGGGCATCGGGGTGGCGAATGTCGATGACGATCTGGCCT‑GGCAGCGCCTCGGCCACTTCCTCGATTTCGATGTCCTTGCCCAGCTCATCGATCACATGATCGATGGAAATGAACTTGGCGCGCTCAAGAGCGCGCTCCAGCACGGCCATGTCGA  >  NC_002947/5750256‑5750513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.