New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2574385 =	15 (0.870)	5 (0.300)	4/266	1.6	26.1%	coding (1098/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	2574435 =	14 (0.850)					coding (1148/1566 nt)	PP_2257	aerotaxis receptor

AGGTGGCCGATGCCAGCGGTGCGGCCATTCGTAACCTGGCCAGCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCG  >  NC_002947/2574240‑2574531                                                                                                                                                  |                                                                                                                                                   aGGTGGCCGATGCCAGCGGTGCGGCCATTCGTAACCTGGCCAGCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACctgc                                                                                                                                                <  1:388937/150‑1 (MQ=255)   gTGGCCCATGCCAGCGGGGCGCCCATTCGTCACCGGGCCAGCGCCGTGACGCAGATCCACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATACTCCTCTGCATTCCCGAGCAAACGAACccgcag                                                                                                                                              <  2:70898/150‑3 (MQ=255)          cctcggctggcgatcgccacggcttcctcggcgccactgcgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCa                                                                                                                                       <  1:70661‑M1/14‑1 (MQ=255)               aGCGGTGCGGCCATTCGTAACCTGGCCAGCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAAcgcc                                                                                                                                  >  1:161483/1‑150 (MQ=255)               aGCGGTGCGGCCATTCGTAACCTGGCCAGCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAAcgcc                                                                                                                                  >  1:62599/1‑150 (MQ=255)                                           ccactgcgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCT‑‑‑‑‑‑‑‑‑CAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                             >  1:170092‑M1/104‑150 (MQ=255)                                               cGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAaaccaac                                                                                                                                                    <  2:93770/100‑1 (MQ=255)                                               cGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAaaccaac                                                                                                                                                    >  1:93770/1‑100 (MQ=255)                                               cGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAggg                                                                                                  >  1:17864/1‑150 (MQ=255)                                                     gggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCgggg                                                                                            >  2:70661‑M1/94‑150 (MQ=255)                                                            aaCCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGcc                                                                                     >  2:288322/1‑150 (MQ=255)                                                                          ccACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCcgacga                                                                       <  2:161483/150‑1 (MQ=255)                                                                          ccACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCcgacga                                                                       <  2:17864/150‑1 (MQ=255)                                                                             gcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                             >  1:410459‑M1/70‑125 (MQ=255)                                                                             gcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                             <  2:410459‑M1/56‑1 (MQ=255)                                                                                           ccGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCttt                                                                                        >  2:125201/1‑116 (MQ=255)                                                                                           ccGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCttt                                                                                        <  1:125201/116‑1 (MQ=255)                                                                                                  cATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGAc                                               >  1:248323/1‑150 (MQ=255)                                                                                                    tCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGAccc                                             <  2:248323/150‑1 (MQ=255)                                                                                                                                               caaccTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGCCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTgcg  >  2:333262/1‑150 (MQ=255)                                                                                                                                                  |                                                                                                                                                   AGGTGGCCGATGCCAGCGGTGCGGCCATTCGTAACCTGGCCAGCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCG  >  NC_002947/2574240‑2574531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.