New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2574385 =	15 (0.870)	5 (0.300)	4/266	1.6	26.1%	coding (1098/1566 nt)	PP_2257	aerotaxis receptor
	?	NC_002947	2574435 =	14 (0.850)					coding (1148/1566 nt)	PP_2257	aerotaxis receptor

GCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGG  >  NC_002947/2574282‑2574570                                                                                                                                                          |                                                                                                                                        ccactgcgcagggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCT‑‑‑‑‑‑‑‑‑CAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                                                                    >  1:170092‑M1/104‑150 (MQ=255)     cGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAggg                                                                                                                                         >  1:17864/1‑150 (MQ=255)           gggcatcgatgatggcctggatgtgcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCgggg                                                                                                                                   >  2:70661‑M1/94‑150 (MQ=255)                  aaCCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGcc                                                                                                                            >  2:288322/1‑150 (MQ=255)                                ccACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCcgacga                                                                                                              <  2:161483/150‑1 (MQ=255)                                ccACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCcgacga                                                                                                              <  2:17864/150‑1 (MQ=255)                                   gcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                                                                    >  1:410459‑M1/70‑125 (MQ=255)                                   gcagggtggactggcgggtcttgtcggccagtgcccgcacctcgtcggcgaccacggcaaagccccggcCCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCggg                                                                                                                                    <  2:410459‑M1/56‑1 (MQ=255)                                                 ccGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCttt                                                                                                                               <  1:125201/116‑1 (MQ=255)                                                 ccGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCttt                                                                                                                               >  2:125201/1‑116 (MQ=255)                                                        cATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGAc                                                                                      >  1:248323/1‑150 (MQ=255)                                                          tCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGAccc                                                                                    <  2:248323/150‑1 (MQ=255)                                                                                                 ccccggccctgctcgcccgcacgggcagcctcgatggcggcgttgagggccagcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGccc                                             >  2:70661‑M2/58‑150 (MQ=255)                                                                                                  cccggccctgctcgcccgcacgggcagcctcgatggcggcgttgagggccagcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGc                                                                     >  1:410459‑M2/57‑125 (MQ=255)                                                                                                  cccggccctgctcgcccgcacgggcagcctcgatggcggcgttgagggccagcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGc                                                                     <  2:410459‑M2/69‑1 (MQ=255)                                                                                                     caaccTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGCCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTgcg                                         >  2:333262/1‑150 (MQ=255)                                                                                                           cccggccctgctcgcccgcacgggcagcctcgatggcggcgttgaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTgg                                   >  1:170092‑M2/48‑150 (MQ=255)                                                                                                            CTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGgc                                  >  1:288322‑M1/1‑150 (MQ=255)                                                                                                               gCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGcc                               >  1:53706/1‑150 (MQ=255)                                                                                                                        gccgccATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGcc                      >  1:219470/1‑150 (MQ=255)                                                                                                                                   ggCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGc           <  2:53706/150‑1 (MQ=255)                                                                                                                                    gCTGCCCGTGCGGGCGAGCAGGGCCAGGGCGTTGCCGTGGTCGCCGACGATGTGCGGGCACTGGCCGACGAGACCCGCGAGTCCACCCTGCACATCCAGGCCATCATCGATGCGCTGCGCAGTGGGGCCGAGGAAGCCGTGGCGCTCGcc          >  2:2706/1‑150 (MQ=255)                                                                                                                                            tgagggccagcaggGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAgg  <  1:70661‑M2/136‑1 (MQ=255)                                                                                                                                            tGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAgg  <  2:219470/150‑1 (MQ=255)                                                                                                                                                          |                                                                                                                                        GCACCGTGACGCAGATCAACCAGGCGGTCAGCCACCTGGCGGGTCAGACCGGCGCCATCGCCGAGGCCGCCGGGATGATCCGCGGCATTGCCGAGCAAACCAACCTGCTGGCCCTCAACGCCGCCATCGAGGCTGCCCGTGCGGGCGAGCAGGGCCGGGGCTTTGCCGTGGTCGCCGACGAGGTGCGGGCACTGGCCGACAAGACCCGCCAGTCCACCCTGCACATCCAGGCCATCATCGATGCCCTGCGCAGTGGCGCCGAGGAAGCCGTGGCGATCGCCAGCCGAGG  >  NC_002947/2574282‑2574570

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.