| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3166465 | 24 (0.760) | 9 (0.300) | 8/254 | 2.3 | 27.3% | coding (854/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase |
| ? | NC_002947 | = 3166487 | 25 (0.830) | coding (876/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase | |||||
GGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3166353‑3166465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCA < NC_002947/3166487‑3166343 GGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAG < 1:200761/150‑1 GTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑ACCCGGCCCTGCGGGTCGGGTGCGG < 2:459016/131‑1 GTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTGCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑ACCCGGCCCTGCGGGTCGGGTGCGG > 1:459016/1‑131 TCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑ACCCGGCCCTGCGGGTCGGGTGCGGTG > 1:255794/1‑121 TCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑ACCCGGCCCTGCGGGTCGGGTGCGGTG < 2:255794/121‑1 CCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCAC‑‑CGCCCCGGCCCTGCGGGTCGGGTGCG < 1:276923/110‑1 CCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCAC‑‑CGCCCCGGCCCTGCGGGTCGGGTGCG > 2:276923/1‑110 CAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCGCCCCGGCCCTGCGGGTCGGGTGCGG > 1:501888/1‑87 CAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCGCCCCGGCCCTGCGGGTCGGGTGCGG < 2:501888/87‑1 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCA > 2:435097/1‑150 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCA > 2:551660/1‑150 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTT > 1:344050/1‑38 ACCGCGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTT < 2:344050/38‑1 GGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3166353‑3166465‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgcGCCCCGGCCCTGCGGGTCGGGTGCGGTGATTTTGTAGGCATCCAGGCTGCTGCCGAAACCCAGCACTTCGGCGTACGGCGTTGCCCCTCGGGCGAGCGCCCGTTCGAGGGTTTCGAGCACGACAAAACCACCGCCCTCACCCGCA < NC_002947/3166487‑3166343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |