| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3166465 | 24 (0.760) | 9 (0.300) | 8/254 | 2.3 | 27.3% | coding (854/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase |
| ? | NC_002947 | = 3166487 | 25 (0.830) | coding (876/1299 nt) | PP_2780 | 3‑oxoacyl‑ACP synthase | |||||
TGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCGATCAAGACCCTGTTCGC > NC_002947/3166343‑3166621 | tGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCgcggt > 2:551660‑M2/1‑145 (MQ=255)tGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCgcggt > 2:435097‑M2/1‑145 (MQ=255) ggTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTg > 2:437945/1‑150 (MQ=255) gTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTgg < 1:153534/150‑1 (MQ=255) ctttGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGAAACACCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAgg‑cggc > 1:147909/2‑150 (MQ=255) tGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACgg > 2:302190/1‑150 (MQ=255) cTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGAt > 1:625087/1‑150 (MQ=255) aaaCCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCg < 1:661957/150‑1 (MQ=255) aaCCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCgg < 2:625087/150‑1 (MQ=255) gcTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACa > 1:634473/1‑150 (MQ=255) tCGTCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAgg < 2:385650/150‑1 (MQ=255) aGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCt < 2:634473/150‑1 (MQ=255) tACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCAc < 1:302190/150‑1 (MQ=255) cTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCGGGCGATGCAGGCCGGCCGAGA‑TCACGCCGGGCTTGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGaca > 1:183874/1‑150 (MQ=255) ggTTTCCGCAGCAGCCTGTATGGCTACAAACTCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGTATGCCGCGCTGGCGCCGCAACAGCTCGATCTGATCAATGCCCACGGTACGTCGACAccc < 2:276888/150‑1 (MQ=255) agcCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATgcc > 1:662872/1‑150 (MQ=255) aTGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGAc < 2:565784/70‑1 (MQ=255) aTGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGAc > 1:565784/1‑70 (MQ=255) cTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCgcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagggtttcgagcacgacaaaaccaccgcc < 1:200761‑M2/150‑114 (MQ=255) tACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGa < 1:646127/100‑1 (MQ=255) tACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGa > 2:646127/1‑100 (MQ=255) tACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTg < 1:437945/150‑1 (MQ=255) aCAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTgg < 1:483561/150‑1 (MQ=255) aaaaTCACCGCACCCGACCCGCAGGGCCGGGGCgcggt > 1:344050‑M2/1‑33 (MQ=255) aaaaTCACCGCACCCGACCCGCAGGGCCGGGGCgcggt < 2:344050‑M2/38‑6 (MQ=255) aaaaTCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCAGAATAACGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCg > 1:382531/1‑150 (MQ=255) cACCGCACCCGACCCGCAGGGCCGGGTcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagggtttcga > 1:255794‑M2/1‑28 (MQ=255) cACCGCACCCGACCCGCAGGGCCGGGTcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagggtttcga < 2:255794‑M2/121‑94 (MQ=255) ccGCACCCGACCCGCAGGGCCGGGTcggtgattttgtaggcatccaggctgctgccgcaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagggtttcgagcacgacaaaac > 1:459016‑M2/1‑26 (MQ=255) ccGCACCCGACCCGCAGGGCCGGGTcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagggtttcgagcacgacaaaac < 2:459016‑M2/131‑106 (MQ=255) ccGCACCCGACCCGCAGGGCCGGGGCgcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttg < 2:501888‑M2/87‑62 (MQ=255) ccGCACCCGACCCGCAGGGCCGGGGCgcggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttg > 1:501888‑M2/1‑26 (MQ=255) cGCACCCGGCCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCCGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGGCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCGACGATGCCGCCGAAACCCTGGCGATCAAGAc < 2:556984/150‑1 (MQ=255) cGCACCCGACCCGCAGGGCCGGGGCggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagg > 2:276923‑M2/1‑25 (MQ=255) cGCACCCGACCCGCAGGGCCGGGGCggtgattttgtaggcatccaggctgctgccgaaacccagcacttcggcgtacggcgttgcccctcgggcgagcgcccgttcgagg < 1:276923‑M2/110‑86 (MQ=255) cccgCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCGATCAAGACCCTGTTCGc < 2:662872/150‑1 (MQ=255) cgCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCGATCaa < 2:47697/136‑1 (MQ=255) cgCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCGATCaa > 1:47697/1‑136 (MQ=255) | TGCGGGTGAGGGCGGTGGTTTTGTCGTGCTCGAAACCCTCGAACGGGCGCTCGCCCGAGGGGCAACGCCGTACGCCGAAGTGCTGGGTTTCGGCAGCAGCCTGGATGCCTACAAAATCACCGCACCCGACCCGCAGGGCCGGGGCGCGGTGCTGGCGATGCAGG‑CGGCCCTGACGGATGCCGGGCTGGCGCCGCAACAGGTCGATCTGATCAATGCCCACGGTACGTCGACACCCCTCAACGATGCCGCCGAAACCCTGGCGATCAAGACCCTGTTCGC > NC_002947/3166343‑3166621 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |