| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4860181 | 27 (0.850) | 10 (0.340) | 8/244 | 2.2 | 25.4% | coding (914/2331 nt) | ligA | DNA ligase |
| ? | NC_002947 | = 4860205 | 34 (1.170) | coding (890/2331 nt) | ligA | DNA ligase | |||||
GACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGT > NC_002947/4860040‑4860327 | gACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACgg < 2:736868/150‑1 (MQ=255) tCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcg > 2:726091‑M1/1‑135 (MQ=255) acacCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAg > 1:108304/1‑150 (MQ=255) gCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑c > 1:103598/1‑150 (MQ=255) ccTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgc > 2:396243‑M2/1‑147 (MQ=255) cTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcg < 1:705917‑M2/150‑5 (MQ=255) gACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctg < 2:37163‑M2/150‑8 (MQ=255) aCCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctgg < 1:726091‑M1/150‑33 (MQ=255) ttCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CGcgagctgggcttcc > 2:372944‑M2/1‑136 (MQ=255) cgcgCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTg < 1:421546/150‑1 (MQ=255) aGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCtt < 2:350048/150‑1 (MQ=255) ggCGTTACTGCACCCCGACGGCCAACCTGGACGTCGACGTCCCGCACCACGGGTAGCTCTTCCATGGCCGGGAACTGGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTg < 2:294028/150‑1 (MQ=255) gCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGa < 1:123472/150‑1 (MQ=255) cGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGaa < 2:642338/150‑1 (MQ=255) aCTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACt > 1:91150/1‑150 (MQ=255) tGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTAc > 2:301422/1‑150 (MQ=255) ccGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctga < 1:692796‑M1/116‑33 (MQ=255) ccGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctga > 2:692796‑M1/1‑84 (MQ=255) gTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGACGACCAT‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCg > 1:451859/1‑150 (MQ=255) ggCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTATTGACCTTGAACACTACCCCGTCGAtct > 2:659410/1‑150 (MQ=255) gCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccg < 1:486819‑M2/130‑30 (MQ=255) gCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccg > 2:486819‑M2/1‑101 (MQ=255) gCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGAtctc > 1:504262/1‑150 (MQ=255) aaCCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATa < 2:504262/150‑1 (MQ=255) aCCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATAc < 1:37163/150‑1 (MQ=255) tCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagccgggcttccgcgcccgtgagccgcgctggg < 1:162157‑M1/97‑34 (MQ=255) tCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagccgggcttccgcgcccgtgagccgcgctggg > 2:162157‑M1/1‑64 (MQ=255) aCATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTa < 1:526510/150‑1 (MQ=255) aTCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctggg > 2:12127‑M1/1‑59 (MQ=255) aTCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctggg < 1:12127‑M1/92‑34 (MQ=255) aTCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTAcg > 2:16697/1‑150 (MQ=255) tCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTATTAagc > 2:222894/1‑150 (MQ=255) aCCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTATTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCg < 1:659410/150‑1 (MQ=255) cTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGcc > 2:508746/1‑150 (MQ=255) cTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGcc < 2:103598/150‑1 (MQ=255) ggTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAAt < 2:705917/150‑1 (MQ=255) tCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGAtag < 2:108304/150‑1 (MQ=255) cATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGATGTTACGCCGCTCGCCAATGTCGCGAtagta > 1:489210/1‑150 (MQ=255) cGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggc > 2:486819‑M1/1‑29 (MQ=255) cGGGAACTTGTGGGCAATCGCCCAGCGCGagctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggc < 1:486819‑M1/130‑102 (MQ=255) aCTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACGTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCAct < 1:301422/150‑1 (MQ=255) gggCAATCGCCCAGCGCGGCTCACGGGAGCGG‑CGCCATGTCTCGCGGTTGGCGGCCAGGCTGTTGACCCCGTGCACTACAGCCGAGAGCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGGGATAGTACGGTACGCACGCTTCgg > 1:459565/1‑149 (MQ=255) ggCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGTCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGAt < 2:144454/150‑1 (MQ=255) ggaagcccaGCTCGcgctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgggtgcagtaacgcctgtggcgcggctgaa > 2:372944‑M1/5‑14 (MQ=255) cccAGCGCGGCTCACGGGCGCGGAAGCCCGG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcga < 1:162157‑M2/97‑65 (MQ=255) cccAGCGCGGCTCACGGGCGCGGAAGCCCGG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcga > 2:162157‑M2/1‑33 (MQ=255) cccAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggat > 2:12127‑M2/1‑33 (MQ=255) cccAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggat < 1:12127‑M2/92‑60 (MQ=255) tcaGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgg > 2:692796‑M2/2‑32 (MQ=255) tcaGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgg < 1:692796‑M2/115‑85 (MQ=255) ccAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTcgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgggtgcagtaacgcctgtggcgcggctgaagccggt < 1:726091‑M2/150‑119 (MQ=255) cAGCGCGagctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgggtgcagtaacgcctgtggcgcggctgaagccggtc < 2:37163‑M1/150‑144 (MQ=255) cgcgagctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgggtgcagtaacgcctgtggcgcggctgaagccggtcaag < 1:705917‑M1/150‑147 (MQ=255) gcgagctgggcttccgcgcccgtgagccgcgctgggcgattgcccacaagttcccggccatggaagagctgaccgaggtgctggatgtcgagttccaggttggccgtacgggtgcagtaacgcctgtggcgcggctgaagccggtcaagg > 2:396243‑M1/1‑3 (MQ=255) | GACACCGTCACACCGGCCACCTTGACCGGCTTCAGCCGCGCCACAGGCGTTACTGCACCCGTACGGCCAACCTGGAACTCGACATCCAGCACCTCGGTCAGCTCTTCCATGGCCGGGAACTTGTGGGCAATCGCCCAGCGCGGCTCACGGGCGCGGAAGCCCAG‑CTCGCGCTGGGCGGCCAGGCTGTTGACCTTGAACACTACCCCGTCGATCTCATACGGCAGGCTGTTACGCCGCTCGCCAATGTCGCGATAGTAGGCCAGGCACTCTTCGATGCCCGCCGCATGT > NC_002947/4860040‑4860327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |