| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3556182 | 25 (0.790) | 8 (0.260) | 6/262 | 2.9 | 26.0% | coding (556/1188 nt) | PP_3140 | group 2 family glycosyl transferase |
| ? | NC_002947 | = 3556204 | 21 (0.670) | coding (578/1188 nt) | PP_3140 | group 2 family glycosyl transferase | |||||
CCTGGCGCGCCGCTGCCACGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGG > NC_002947/3556061‑3556333 | ccTGGCGCGCCGCTGCCACGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTggg > 2:149185/1‑150 (MQ=255) cgcTGCCACGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCtgccatgc < 1:149185/150‑1 (MQ=255) aCGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGa > 1:318762/1‑150 (MQ=255) cGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGTTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGAt < 2:69988/150‑1 (MQ=255) ttGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGgcg > 1:767894/1‑150 (MQ=255) tCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCtg < 1:427844/114‑1 (MQ=255) tCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGAGGCCACGTGGCTGGGCGCGCCTGGGCCtg > 2:427844/1‑114 (MQ=255) gATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCt < 2:767894/150‑1 (MQ=255) cccagCACCTGCCGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAg > 2:478753/5‑150 (MQ=255) aCCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGAt < 1:756008/150‑1 (MQ=255) ggTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATg < 2:638500/150‑1 (MQ=255) tGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTgg < 1:344981/150‑1 (MQ=255) gCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGt > 2:81820/1‑150 (MQ=255) ccGTGTTTGCCTGGGGTGTCGAGGAACGGGTTTGGGCACTCTGCCCGGCTCGCCTGTGCCTGCCATGCCAACTGCTGGGCGCGGGCATGGCCTTCGGCACACCCTCTCGGACTCGCTTCATCCTGGCCAATGGTCATCTGGTCGAGGAtg > 2:773206/1‑150 (MQ=255) tttGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAg < 2:318762/150‑1 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcg < 2:127322‑M2/128‑95 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcg > 2:663791‑M2/1‑34 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcg < 1:663791‑M2/128‑95 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcg > 1:127322‑M2/1‑34 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAAc > 2:630567/1‑104 (MQ=255) tCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAAc < 1:630567/104‑1 (MQ=255) ccctGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcgg > 2:132766‑M2/2‑28 (MQ=255) aCCTGGTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcggcaacctgcaccctcaacccagcacctgccggtgcacgcatcagatacagcgactgtaccgggcgg < 1:132766‑M2/123‑96 (MQ=255) tGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCcagc > 1:672644/1‑150 (MQ=255) gTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcg < 1:714876‑M2/52‑30 (MQ=255) gTGCGGCCACGTGGCTGGGCGCGccaggttcttgacccgccaggcaaactcg > 2:714876‑M2/1‑23 (MQ=255) gCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAggg > 1:10705/1‑150 (MQ=255) cgcgcCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGc < 2:501999/125‑1 (MQ=255) cgcgcCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTCTGc > 1:501999/1‑125 (MQ=255) | CCTGGCGCGCCGCTGCCACGCACTTGCCCGCCCGGTACAGTCGCTGTATCTGATGCGTGCACCGGCAGGTGCTGGGTTGAGGGTGCAGGTTGCCGAGTTTGCCTGGCGGGTCAAGAACCTGGTGCGGCCACGTGGCTGGGCGCGCCTGGGCCTGCCATGCCAACTGATGGGCGCGGGCATGGCGTTCGGCTGGCACGATCTGAGTCTGATCAACCTGGCCAATGGTCATCTGGTCGAGGATGTGAAGCTGGGCCTGGACCTTTGCCAGCAGGG > NC_002947/3556061‑3556333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |