New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5734086 =	45 (1.190)	6 (0.170)	6/246	3.5	12.5%	intergenic (‑56/+101)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
	?	NC_002947	5734165 =	43 (1.250)					intergenic (‑135/+22)	proY/hutH	proline (histidine) APC transporter/histidine ammonia‑lyase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGG  >  NC_002947/5734033‑5734300                                                                                                                                     |                                                                                                                                        cACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGAGCATCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCCGCGGCCCCAgg                                                                                                                        >  1:160096/1‑150 (MQ=255)    gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGTACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc                                                                                                                     <  1:770477/150‑1 (MQ=255)    gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc                                                                                                                     >  2:627405/1‑150 (MQ=255)    gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc                                                                                                                     >  1:457484/1‑150 (MQ=255)        ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGCCGTTa                                                                                                                 >  2:297719/1‑150 (MQ=255)               gTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTCGAAACCGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt                                                                                                          <  1:297719/150‑1 (MQ=255)               gTTTTTGTGGTCGTGAGATTCAGGGGGCTGATGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCtt                                                                                                          <  1:590008/150‑1 (MQ=255)                 ttttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  2:890698/150‑1 (MQ=255)                   ttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCCCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCa                                                                                                      <  1:722262/150‑1 (MQ=255)                      tgGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTa                                                                                                   <  1:694230/150‑1 (MQ=255)                        gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca                                                                                                 >  2:218233/1‑150 (MQ=255)                        gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca                                                                                                 >  1:694468/1‑150 (MQ=255)                             gagaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        <  1:891316/138‑1 (MQ=255)                             gagaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg                                                                                                        >  2:891316/1‑138 (MQ=255)                              agaTTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGTGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACccgcc                                                                                           >  2:245125/1‑150 (MQ=255)                                 ttCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCGGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTCGGCAGTACACCCGCCGgc                                                                                        >  2:530103/1‑150 (MQ=255)                                      ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCaa                                                                                   <  2:457484/150‑1 (MQ=255)                                       gggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAg                                                                                  >  1:9497/1‑150 (MQ=255)                                          ctgctgCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg                                                                               <  2:694468/150‑1 (MQ=255)                                           tgcgcagcAGCCCCCTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGGTACAGGCTTGGCAGTACACCCGCCGGCAGCAATCCgg                                                                              >  2:470907/7‑150 (MQ=39)                                            gctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGt                                                                             <  1:48995/150‑1 (MQ=255)                                              tgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCa                                                                           >  2:639508/1‑150 (MQ=255)                                                         ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgggg                                                                                                                      >  2:556356/1‑96 (MQ=255)                                                         ttCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgggg                                                                                                                      <  1:556356/96‑1 (MQ=255)                                                         ggagcgGGCGTGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCgg                                                                              <  2:516971/133‑1 (MQ=255)                                                                 cACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGTGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAg                                                        <  1:245125/150‑1 (MQ=255)                                                                      ccGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCa                                                   <  1:639508/150‑1 (MQ=255)                                                                              acaGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCttt                                           >  2:433867/1‑150 (MQ=255)                                                                                aGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCAGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTc                                         >  1:721906/1‑150 (MQ=255)                                                                                  gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa                                                                                                                 >  2:26765/1‑76 (MQ=255)                                                                                  gggATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa                                                                                                                 <  1:26765/76‑1 (MQ=255)                                                                                      tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATc                                   <  1:218233/150‑1 (MQ=255)                                                                                      tGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGAAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGGCCACGGCCTTTTCGATATc                                   <  2:9497/150‑1 (MQ=255)                                                                                         tgtTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCgg                                >  1:835956/1‑150 (MQ=255)                                                                                             ttGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGcgcg                            >  1:565285/1‑150 (MQ=255)                                                                                                    tACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAac                     <  1:627405/150‑1 (MQ=255)                                                                                                      cTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacgg                   <  2:565285/150‑1 (MQ=255)                                                                                                       ttCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggt                  >  2:894867/1‑150 (MQ=255)                                                                                                        tCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCCGCCCCAGGGGCGTTACAGGCTTGGCAGTAAACACGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacggtc                 >  1:673223/1‑150 (MQ=255)                                                                                                                 gCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTa        <  1:419814/150‑1 (MQ=255)                                                                                                                     gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc                                                                    <  1:71597/86‑1 (MQ=255)                                                                                                                     gcgcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTAcc                                                                    >  2:71597/1‑86 (MQ=255)                                                                                                                       gcgcCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCgg  <  2:560569/150‑1 (MQ=255)                                                                                                                           ccGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg                    <  1:124826/128‑1 (MQ=255)                                                                                                                           ccGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAacg                    >  2:124826/1‑128 (MQ=255)                                                                                                                                     |                                                                                                                                        CACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGTCCACGGCCTTTTCGATATCCGGCGCGAAGAAACGGTCACGGTCGTAGTGCGG  >  NC_002947/5734033‑5734300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.