New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2214501	34 (0.690)	4 (0.080)	4/242	NT	10.8%	coding (226/954 nt)	PP_1957	Pdr/VanB family oxidoreductase
	?	NC_002947	= 2214515	33 (0.700)					coding (240/954 nt)	PP_1957	Pdr/VanB family oxidoreductase

GAGACTGATCGCTATGTAATTGCCGTGCTCAACGAGCCAACCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2214456‑2214501 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcTCGGGAGCCGCCGCGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGATCGTTACTCAACGAGTATTGGCGCACAAGGCCGTCTCGAACCTTTACATCTATATGCGCTCCAGCCGTGAACGCTGGAAGCT  <  NC_002947/2214515‑2214367                                                                                                                                                                                                     GAGACTGATCGCTATGTAATTGCCGTGCTCAACGAGCCAACCTCGCTCGGGAGCCGCCGCGCGA                                                                                                                                     >  1:1280838/1‑64 GAGACTGATCGCTATGTAATTGCCGTGCTCAACGAGCCAACCTCGCTCGGGAGCCGCCGCGCGA                                                                                                                                     <  2:1280838/64‑1                         GTGCTCAACGAGCCAACCTCGCGCGGCGGCTCCCGAGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGATCGTTAC                                                                             >  1:332457/1‑96                         GTGCTCAACGAGCCAACCTCGCGCGGCGGCTCCCGAGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGATCGTTAC                                                                             <  2:332457/96‑1                                            CGCTCGGGAGCCGCCGCGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGATCGTTACTCAACGAGTATTGGCGCACAAGGCCGTCTCGAACCTTTACATCTATATGCGCTCCAGCCGTGAACGCTGGAAG    <  2:753456/150‑1                                              CTCGGGAGCCGCCGCGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGAAAGTTACTCAACGAGTATTGGCGCACAAGGCCGTCTCGAACCTTTACATCTATATGCGCTCCAGCCGTGAACGCTGGAAGCT  >  2:301889/1‑150                                                                                                                                                                                                     GAGACTGATCGCTATGTAATTGCCGTGCTCAACGAGCCAACCTCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2214456‑2214501 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgcTCGGGAGCCGCCGCGCGAGGTTGGCTCGTTGAGCACGGCAATTACATAGCGATCAGTCTCAACTGGATCGTTACTCAACGAGTATTGGCGCACAAGGCCGTCTCGAACCTTTACATCTATATGCGCTCCAGCCGTGAACGCTGGAAGCT  <  NC_002947/2214515‑2214367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.