New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2303163 = | 48 (0.980) | 6 (0.140) | 5/226 | NT | 13.6% | intergenic (‑205/+90) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
? | NC_002947 | 2303221 = | 33 (0.740) | intergenic (‑263/+32) | PP_mr30/PP_2027 | C4 ncRNA/hypothetical protein |
TCCGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303322‑2303163 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAA > NC_002947/2303221‑2303361 tcaGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGAGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGT > 2:860824/4‑150 CCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCA > 2:187003/1‑150 CCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAG > 2:570351/1‑150 CCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGC > 1:1187918/1‑117 CCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGC < 2:1187918/117‑1 CTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAA < 1:187003/150‑1 CGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTA < 1:570351/150‑1 GTGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGC < 1:491153/150‑1 TGGGAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCC > 1:472316/1‑150 GAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAA < 1:1192522/149‑1 GAGCGGGCATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAA > 2:1192522/1‑149 TCCGCCAGCTGAGCAGGTGTTGCTGCCGGCGGGCGAGAACGGCAGCTTGCCGCCGCTCTATCCCAAGTAAGTGGTTGCCTGTGCGGGCCTCTTCGCGGGCATGCCCGCTCCCACTGACCGCGTACGCCGAGAACCTTGCGCCGTACCTGTGGGAGCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2303322‑2303163 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgggagcgggcATGCCCGCGAAGAGGCCCGCACAGGCAACCACTTACTTGGGATAGAGCGGCGGCAAGCTGCCGTTCTCGCCCGCCGGCAGCAACACCTGCTCAGCTGGCGGAATGGTACCAATCGCCCGCCACAAATCCTCCCCCTGCCAA > NC_002947/2303221‑2303361 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |