New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2740020	36 (0.730)	3 (0.060)	3/242	NT	7.8%	coding (2356/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein
	?	NC_002947	= 2740051	36 (0.760)					coding (2387/4494 nt)	PP_2395	leucine‑rich repeat‑containing protein

CTCGGGTATTTGAAGCGTTGTACCTTGATACGCCGCAGCATGCAGACCTGGCACGGGTGGCCTTGGGCTTGTTGCGGTATCTACCCGGAAGCGAACAAGGTGTGCGCTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2739907‑2740020 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCCGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTATCAAGGTACAACGCTTCAAATACCCGAGCCTG  <  NC_002947/2740051‑2739903                                                                                                                                                                                                                                                                         CTCGGGTATTTGAAGCGTTGTACCTTGATACGCCGCAGCATGCAGACCTGGCACGGGTGGCCTTGGGCTTGTTGCGGTATCTACCCGGAAGCGAACAAGGTGTGCGCTGGCGCCAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGC                                                                                                                   <  2:540667/150‑1                        CTTGATACGCCGCAGCATGCAGACCTGGCACGGGTGGCCTTGGGCTTGTTGCGGTATCTCCCCGGAAGCGAACAAGGTGTGCGCTGGCGCCAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACC                                                                                                        <  1:726312/138‑1                        CTTGATACGCCGCAGCATGCAGACCTGGCACGGGTGGCCTTGGGCTTGTTGCGGTATCTACCCGGAAGCGAACAAGGTGTGCGCTGGCGCCAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACC                                                                                                        >  2:726312/1‑138                                                                                                                 CCAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCCGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTA                                  >  1:254991/1‑119                                                                                                                 CCAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCCGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTA                                  <  2:254991/119‑1                                                                                                                  CAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCCGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTATCAAGGTACAACGCTTCAAATACCCGAGCCTG  >  2:905123/1‑150                                                                                                                  CAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCAGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTATCAAGGTACAACGCTTCAAATACCCGAGCCTG  >  2:404569/1‑150                                                                                                                                                                                                                                                                         CTCGGGTATTTGAAGCGTTGTACCTTGATACGCCGCAGCATGCAGACCTGGCACGGGTGGCCTTGGGCTTGTTGCGGTATCTACCCGGAAGCGAACAAGGTGTGCGCTGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2739907‑2740020 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccAGTATCGGCCCGCCCAGGGAGCCTTCGTACAGGCGCCAGCGCACACCTTGTTCGCTTCCGGGTAGATACCGCAACAAGCCCAAGGCCACCCGTGCCAGGTCTGCATGCTGCGGCGTATCAAGGTACAACGCTTCAAATACCCGAGCCTG  <  NC_002947/2740051‑2739903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.