New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2974781 = | 42 (0.860) | 4 (0.090) | 4/236 | NT | 8.8% | coding (671/777 nt) | PP_2601 | IclR family transcriptional regulator |
? | NC_002947 | 2974820 = | 43 (0.930) | coding (710/777 nt) | PP_2601 | IclR family transcriptional regulator |
GAACGGGCGCAACAGACTGTGCGGTAATCGACCGGAATATTCCCTCAGGCAAACAGCTCGCTGGCGGGACTGGCCGCCGACAGCTCTTCTGCCGCCGACAACAATAGCGGTGCCAGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2974931‑2974781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAGCGAGCTGTTTGCCTGAGGGAATATTCCGGTCGATTACCGCACAGTCTGTTGCGCCCGTTCT > NC_002947/2974820‑2974932 GAACGGGCGCAACAGACTGTGCGGTAATCGACCGGAATATTCCCTCAGGCAAACAGCTCGCTGGCGGGACTGGCCGCCGACAGCTCTTCTGCCGCCGACAACAATAGCGGTGCCAGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTG < 2:737503/150‑1 AACAATAGCGGTGCCAGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTGGCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAGCGAGCTGTTTGCCTGAGGGAATATTCCGGTCGATTACCGCACAGTC > 2:866487/1‑150 AGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTGGCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAG > 1:909290/1‑89 AGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTGGCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAG < 2:909290/89‑1 GCTGCGAGGCGGCTCTGTGCCAGCCGCGCAGCGCTGGCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAGCGAGCTGTTTGCCTGAGGGAATATTCCGGTCGATTACCGCACAGTCTGTTGCGCCCGTTCT > 2:1235374/1‑150 GAACGGGCGCAACAGACTGTGCGGTAATCGACCGGAATATTCCCTCAGGCAAACAGCTCGCTGGCGGGACTGGCCGCCGACAGCTCTTCTGCCGCCGACAACAATAGCGGTGCCAGCGCTGCGAGGCGGCTCTGTGCCAGCCGC‑‑‑GCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2974931‑2974781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgctggCACCGCTATTGTTGTCGGCGGCAGAAGAGCTGTCGGCGGCCAGTCCCGCCAGCGAGCTGTTTGCCTGAGGGAATATTCCGGTCGATTACCGCACAGTCTGTTGCGCCCGTTCT > NC_002947/2974820‑2974932 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |