New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2981188 = | 55 (1.120) | 3 (0.070) | 3/230 | NT | 5.9% | coding (1220/1734 nt) | PP_2607 | hypothetical protein |
? | NC_002947 | 2981219 = | 45 (1.000) | coding (1189/1734 nt) | PP_2607 | hypothetical protein |
ACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2981338‑2981188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaagcccgtAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCT > NC_002947/2981219‑2981359 ACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCG > 1:201182/1‑150 CGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGGCCGCGCCAGGCCAAGCCCGTAGCGGTTCATTGCCTCGG < 2:416514/150‑1 GCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGT > 1:736370/1‑112 GCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGT < 2:736370/112‑1 tcagGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGg > 1:685867/5‑149 CAAGCCCGTAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCT < 2:102907/150‑1 ACCAAACCGGGCGGCGCTTCGTCAACGAGTCCGACTCCTACCACCACTTCGTGCACACAATGTTCGCCAAAGGCATTGCCAGCTGCTGGCTGGTCTGCGATGCCGAGGCAATGAACCGCTACGGGCTTGGCCTGGCGCGGCCCAAGCCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2981338‑2981188 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaagcccgtAGCGGTTCATTGCCTCGGCATCGCAGACCAGCCAGCAGCTGGCAATGCCTTTGGCGAACATTGTGTGCACGAAGTGGTGGTAGGAGTCGGACTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCT > NC_002947/2981219‑2981359 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |