New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3214883 =	40 (0.820)	3 (0.070)	3/232	NT	7.6%	coding (755/3129 nt)	mexD	multidrug RND transporter MexD
	?	NC_002947	3214934 =	36 (0.790)					coding (806/3129 nt)	mexD	multidrug RND transporter MexD

GCGGTCTGGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3215039‑3214883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgcaTGGCCATCGGTAGCGAGAACTACAACCTGTCGGCGCGCCTGAACGGCCACCCGGCGGTGGCCGGTGCGGTGCAGTTGGCGCCGGGCGCCAATGCCATCCAGAC  >  NC_002947/3214934‑3215036                                                                                                                                                                                                                                                                      GCGGTCTGGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTG                                                                                                                <  1:687655/150‑1  CGGTCTGGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGG                                                                                                               >  2:1240777/1‑150   GGTCTGGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGC                                                                                                              >  2:1131776/1‑150        GGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCA                                                                                                         <  2:316178/150‑1                                                                                                         CATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCATGGCCATCGGTAGCGAGAACTACAACCTGTCGGCGCGCCTGAACGGCCACCCGGCGGTGGCCGGTGCGGTGCAGTTGGCGCCGGGCGCCAATGCCAT        >  1:859543/1‑150                                                                                                           TGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCATGGCCATCTGTAGCGAGAACTACAACCTGTCGGCGCGCCTGAACGGCCACCCGGCGGTGGCCGGTGCGGTGCAGTTGGCGCCGGGCGCCAATGCCATCC      >  1:276156/1‑150                                                                                                               CGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCATGGCCATCGGTAGCGAGAACTACAACCTGTCGGCGCGCCTGAACGGCCACCCGGCGGTGGCCGGTGCGGTGCAGTTGGCGCCGGGCGCCAATGCCATCCAGAC  <  2:859543/150‑1                                                                                                                                                                                                                                                                      GCGGTCTGGATGGCATTGGCGCCCGGCGCCAACTGCACCGCACCGGCCACCGCCGGGTGGCCGTTCAGGCGCGCCGACAGGTTGTAGTTCTCGCTACCGATGGCCATGCGCGCCACATCACCCAGGCGGACGCTGGAGCCATCGGGGTTGGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3215039‑3214883 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgcgcaTGGCCATCGGTAGCGAGAACTACAACCTGTCGGCGCGCCTGAACGGCCACCCGGCGGTGGCCGGTGCGGTGCAGTTGGCGCCGGGCGCCAATGCCATCCAGAC  >  NC_002947/3214934‑3215036

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.