New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3387448 | 48 (0.980) | 5 (0.110) | 5/234 | NT | 9.4% | coding (186/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
? | NC_002947 | = 3387482 | 52 (1.130) | coding (220/795 nt) | PP_2989 | short‑chain dehydrogenase/reductase family oxidoreductase |
CTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387298‑3387448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccga‑cTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCT < NC_002947/3387482‑3387442 cgCCAGCGGCATTGGCGCAACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA > 2:444698/3‑150 CAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTANGNCTGCGCNAGGAAAGCCATGNGGCCGTTGAGGTGCTGCCAGCCGAnct < 1:830640/150‑4 TCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCACGGACAGGTCTGCCGAGCTTGTCA > 2:420655/1‑150 GTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGC < 1:1056122/150‑1 CGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCT < 1:420655/150‑1 ATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CTTTCAAGCACGGACAGGTCTGCCGAGCTTGT < 1:25811/124‑1 ATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CTTTCAAGCACGGACAGGTCTGCCGAGCTTGT > 2:25811/1‑124 CTCCAGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3387298‑3387448 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccga‑cTTTCAAGCACGGACAGGTCTGCCGAGCTTGTCAGGTCGGCT < NC_002947/3387482‑3387442 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |