New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3387448	48 (0.980)	5 (0.110)	5/234	NT	9.4%	coding (186/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 3387482	52 (1.130)					coding (220/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase

AGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACG  >  NC_002947/3387302‑3387592                                                                                                                                                    |                                                                                                                                                 aGCGGCATTGGCGCCACCTACGCCAAGCTTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGTATGGAGGCGCTTGCATTACGTCTGCGCTATGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTg                                                                                                                                               >  1:494170/1‑150 (MQ=255)     gCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACaa                                                                                                                                           <  1:1128738/150‑1 (MQ=255)      cATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAg                                                                                                                                          <  1:438260/150‑1 (MQ=255)             gcCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCa                                                                                                                                   <  2:513472/150‑1 (MQ=255)                cccTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTATGTCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGAc                                                                                                                                <  1:781526/149‑1 (MQ=255)                aCCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGAc                                                                                                                                <  1:576326/150‑1 (MQ=255)                 ccTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGAcc                                                                                                                               >  2:382974/1‑150 (MQ=255)                  cTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCt                                                                                                                              >  1:856732/1‑150 (MQ=255)                     cGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTc                                                                                                                           <  2:856732/150‑1 (MQ=255)                       ccGAGCGTTTCGCCCGTCGTGGCCACGTTCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCg                                                                                                                         <  1:444698/150‑1 (MQ=255)                        cGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCt                                                                                                                                        <  2:560213/134‑1 (MQ=255)                        cGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCt                                                                                                                                        >  1:560213/1‑134 (MQ=255)                        cGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGt                                                                                                                        >  2:704731/1‑150 (MQ=255)                            cGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCtt                                                                                                                    <  1:382974/150‑1 (MQ=255)                             gTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTg                                                                                                                   >  2:1006158/1‑150 (MQ=255)                                tCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCtgacaagcacggacaggtctgccgagcttgtca                                                                                                                 >  2:420655‑M1/1‑117 (MQ=255)                                tCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGaaa                                                                                                                <  2:708126/150‑1 (MQ=255)                                      gtcgtGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑Ctttcaagcacggacaggtctgccgagcttgtcaggtcggc                                                                                                          <  1:1056122‑M1/150‑41 (MQ=255)                                        cgtGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCtgacaagcacggacaggtctgccgagcttgtcaggtcggct                                                                                                         <  1:420655‑M1/150‑42 (MQ=255)                                              cACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGcgac                                                                                                  >  1:503109/1‑150 (MQ=255)                                                      cATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTCTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCaa                                                                                          >  1:206156/1‑150 (MQ=255)                                                       aTCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑Ctttcaagcacggacaggtctgccgagcttgt                                                                                                                   >  2:25811‑M1/1‑93 (MQ=255)                                                       aTCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑Ctttcaagcacggacaggtctgccgagcttgt                                                                                                                   <  1:25811‑M1/124‑32 (MQ=255)                                                           ttGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCg                                                                                     >  1:21380/1‑150 (MQ=255)                                                               ggCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgt                                                                                 <  2:503109/150‑1 (MQ=255)                                                                  gcgcgACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGtt                                                                              >  1:753558/1‑150 (MQ=255)                                                                      gACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATc                                                                          <  2:968244/150‑1 (MQ=255)                                                                       acacATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCCTAAAATGCGGCGGCGCGACGACGCGAATATCGGCGTGTTGATca                                                                         >  2:280546/1‑150 (MQ=255)                                                                              gcgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAAcgc                                                                  <  1:704731/150‑1 (MQ=255)                                                                               cgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAAcgcg                                                                 <  1:365518/150‑1 (MQ=255)                                                                                    ggAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTAt                                                            <  2:1068969/150‑1 (MQ=255)                                                                                           cTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATcaa                                                                        <  2:284065/131‑1 (MQ=255)                                                                                           cTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATcaa                                                                        >  1:284065/1‑131 (MQ=255)                                                                                               cATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgtgt                                                                               <  2:985860/120‑1 (MQ=255)                                                                                               cATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgtgt                                                                               >  1:985860/1‑120 (MQ=255)                                                                                                 ttACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                               >  2:1235358/1‑150 (MQ=255)                                                                                                      tCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                               <  2:1187544/145‑1 (MQ=255)                                                                                                      tCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                               >  1:1187544/1‑145 (MQ=255)                                                                                                          cgcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTg                                      >  2:820213/1‑150 (MQ=255)                                                                                                            cgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGa                                    <  2:21380/150‑1 (MQ=255)                                                                                                            cgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGa                                    <  1:1006158/150‑1 (MQ=255)                                                                                                              aGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAcc                                  >  2:68580/1‑150 (MQ=255)                                                                                                                       aTGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                         >  2:495690/1‑150 (MQ=255)                                                                                                                        tgtgGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGa                        <  1:1235358/150‑1 (MQ=255)                                                                                                                               gTTGAGGTGCTGCCAGCCGA‑TCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCgg                                                                <  2:100561/103‑1 (MQ=255)                                                                                                                               gTTGAGGTGCTGCCAGCCGA‑TCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCgg                                                                >  1:100561/1‑103 (MQ=255)                                                                                                                                 tGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAATTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGa               <  1:726679/150‑1 (MQ=255)                                                                                                                                           ccAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                               >  2:10578/1‑108 (MQ=255)                                                                                                                                           ccAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                               <  1:10578/108‑1 (MQ=255)                                                                                                                                           ccAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                         >  1:1045175/1‑130 (MQ=255)                                                                                                                                           ccAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                         <  2:1045175/130‑1 (MQ=255)                                                                                                                                             ggCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAGAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGGCCGCTGAAGCTATTGGGCGCCTTGTCAc   >  2:321755/2‑150 (MQ=255)                                                                                                                                             aGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGTCAggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacg   <  1:420655‑M2/150‑110 (MQ=255)                                                                                                                                             aGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCAc   >  2:950876/1‑150 (MQ=255)                                                                                                                                              gCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacgac  <  1:1056122‑M2/150‑111 (MQ=255)                                                                                                                                              gCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACg  >  1:1061626/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                 AGCGGCATTGGCGCCACCTACGCCGAGCGTTTCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGA‑CCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACG  >  NC_002947/3387302‑3387592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.