New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3387448	48 (0.980)	5 (0.110)	5/234	NT	9.4%	coding (186/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase
	?	NC_002947	= 3387482	52 (1.130)					coding (220/795 nt)	PP_2989	short‑chain dehydrogenase/reductase family oxidoreductase

TCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCA  >  NC_002947/3387333‑3387628                                                                                                                                                      |                                                                                                                                                   tCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGaaa                                                                                                                                                    <  2:708126/150‑1 (MQ=255)               cACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGcgac                                                                                                                                      >  1:503109/1‑150 (MQ=255)                       cATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTCTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCaa                                                                                                                              >  1:206156/1‑150 (MQ=255)                            ttGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCg                                                                                                                         >  1:21380/1‑150 (MQ=255)                                ggCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgt                                                                                                                     <  2:503109/150‑1 (MQ=255)                                   gcgcgACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGtt                                                                                                                  >  1:753558/1‑150 (MQ=255)                                       gACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATc                                                                                                              <  2:968244/150‑1 (MQ=255)                                        acacATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCCTAAAATGCGGCGGCGCGACGACGCGAATATCGGCGTGTTGATca                                                                                                             >  2:280546/1‑150 (MQ=255)                                               gcgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAAcgc                                                                                                      <  1:704731/150‑1 (MQ=255)                                                cgcATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAAcgcg                                                                                                     <  1:365518/150‑1 (MQ=255)                                                     ggAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTAt                                                                                                <  2:1068969/150‑1 (MQ=255)                                                            cTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATcaa                                                                                                            <  2:284065/131‑1 (MQ=255)                                                            cTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATcaa                                                                                                            >  1:284065/1‑131 (MQ=255)                                                                cATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgtgt                                                                                                                   <  2:985860/120‑1 (MQ=255)                                                                cATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCgtgt                                                                                                                   >  1:985860/1‑120 (MQ=255)                                                                  ttACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                                                                   >  2:1235358/1‑150 (MQ=255)                                                                       tCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                                                                   <  2:1187544/145‑1 (MQ=255)                                                                       tCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                                                                   >  1:1187544/1‑145 (MQ=255)                                                                           cgcgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTg                                                                          >  2:820213/1‑150 (MQ=255)                                                                             cgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGa                                                                        <  2:21380/150‑1 (MQ=255)                                                                             cgAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGa                                                                        <  1:1006158/150‑1 (MQ=255)                                                                               aGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAcc                                                                      >  2:68580/1‑150 (MQ=255)                                                                                        aTGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                                                             >  2:495690/1‑150 (MQ=255)                                                                                         tgtgGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGa                                                            <  1:1235358/150‑1 (MQ=255)                                                                                                gTTGAGGTGCTGCCAGCCGATCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCgg                                                                                                    >  1:100561/1‑103 (MQ=255)                                                                                                gTTGAGGTGCTGCCAGCCGATCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCgg                                                                                                    <  2:100561/103‑1 (MQ=255)                                                                                                  tGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAATTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGa                                                   <  1:726679/150‑1 (MQ=255)                                                                                                            ccAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                                                                   >  2:10578/1‑108 (MQ=255)                                                                                                            ccAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGggt                                                                                   <  1:10578/108‑1 (MQ=255)                                                                                                            ccAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                                                             >  1:1045175/1‑130 (MQ=255)                                                                                                            ccAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTg                                                             <  2:1045175/130‑1 (MQ=255)                                                                                                              ggCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAGAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGGCCGCTGAAGCTATTGGGCGCCTTGTCAc                                       >  2:321755/2‑150 (MQ=255)                                                                                                              aGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGTCAggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacg                                       <  1:420655‑M2/150‑110 (MQ=255)                                                                                                              aGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCAc                                       >  2:950876/1‑150 (MQ=255)                                                                                                               gCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacgac                                      <  1:1056122‑M2/150‑111 (MQ=255)                                                                                                               gCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACg                                      >  1:1061626/1‑150 (MQ=255)                                                                                                                      tGACAAGCTCGGCAGACCTGTCCGTGCTTGTCAggtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggatgagatcgtggccacgacgggcga                               >  2:420655‑M2/1‑33 (MQ=255)                                                                                                                        aCAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggat                                                       <  1:25811‑M2/124‑94 (MQ=255)                                                                                                                        aCAAGCTCGGCAGACCTGTCCGTGCTTGAAAgtcggctggcagcacctcaacggccacatggctttcctcgcgcagacgtaatgcaagcgcctccatgcgcgatgtgtcgcgcgccacaaggat                                                       >  2:25811‑M2/1‑31 (MQ=255)                                                                                                                          aaGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGGCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTAc                           >  1:211322/1‑150 (MQ=255)                                                                                                                            gCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACCACGCTGGTATGGCGTTACGGGTTTGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTCCcg                         >  2:39510/1‑150 (MQ=255)                                                                                                                             cTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCACATGCAGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAGCTGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACcgc                        >  1:997112/1‑150 (MQ=255)                                                                                                                             cTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACcgc                        <  1:68580/150‑1 (MQ=255)                                                                                                                                 gCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTg                    >  2:1168987/1‑150 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAc                                                                       <  1:1147909/93‑1 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAc                                                                       <  1:1148273/93‑1 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAc                                                                       >  2:1148273/1‑93 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGAc                                                                       >  2:1147909/1‑93 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCgg              <  1:495690/150‑1 (MQ=255)                                                                                                                                       cTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCgg              <  1:950876/150‑1 (MQ=255)                                                                                                                                         gTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCt            >  1:1274551/1‑150 (MQ=255)                                                                                                                                           ccGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCg          >  2:923953/1‑150 (MQ=255)                                                                                                                                           ccGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCg          >  2:923963/1‑150 (MQ=255)                                                                                                                                            cGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATc                                                                                                              <  1:895908/49‑1 (MQ=255)                                                                                                                                            cGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATc                                                                                                              >  2:895908/1‑49 (MQ=255)                                                                                                                                                cTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCgctgct     <  1:923953/150‑1 (MQ=255)                                                                                                                                                cTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCgctgct     <  1:923963/150‑1 (MQ=255)                                                                                                                                                 ttGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGctgctg    >  2:291702/1‑150 (MQ=255)                                                                                                                                                   gAAAGTCGGCTGCGCGACGAAGCCACAATCAGCGTGTTGATCAACAAAACGAGTATGTCCCAAACGGGGGGGTGCTTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCa  >  2:787931/1‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                   TCGCCCGTCGTGGCCACGATCTCATCCTTGTGGCGCGCGACACATCGCGCATGGAGGCGCTTGCATTACGTCTGCGCGAGGAAAGCCATGTGGCCGTTGAGGTGCTGCCAGCCGACCTGACAAGCTCGGCAGACCTGTCCGTGCTTGAAAGTCGGCTGCGCGACGACGCCAATATCGGCGTGTTGATCAACAACGCGGGTATGGCCCAATCGGGTGGTTTCCTGGACCAGTCCGCTGAAGCTATTGAGCGCCTTGTCACGCTCAACACTACCGCGCTGACGCGGCTCGCTGCTGCA  >  NC_002947/3387333‑3387628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.