New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3427532	39 (0.800)	3 (0.060)	3/240	NT	7.6%	coding (1438/2037 nt)	PP_3042	terminase large subunit
	?	NC_002947	= 3427557	35 (0.740)					coding (1463/2037 nt)	PP_3042	terminase large subunit

GGCGTGAGCCTGGCAATCCTTGCCACCGGCATCGACTCCGGCGGTCACCATACGCATGAGGTATACCAATTCACTCGTGTGCGCCGTTGGCGCAACGTGTTCGCGCTCAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3427418‑3427532 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgATCACCGCCTTACCCGGCTTGCTCGCGCCCTTGAGCGCGAACACGTTGCGCCAACGGCGCACACGAGTGAA  <  NC_002947/3427557‑3427487                                                                                                                                                                                            GGCGTGAGCCTGGCAATCCTTGCCACCGGCATCGACTCCGGCGGTCACCATACGCATGAGGTATACCAATTCACTCGTGTGCGCCGTTGGCGCAACGTGTTCGCGCTCAAGGGCGATCACCGCCTTACCCGGCTTGCTCGCGCCCTTGAG                                      <  2:205762/150‑1                                                               ATACCAATTCACTCGTGTGCGCCGTTGGCGCAACGTGTTCGCGCTCAAGGGCGATCACCGCCTTACCCGGCTTGCTC                                                 <  1:1257117/77‑1                                                               ATACCAATTCACTCGTGTGCGCCGTTGGCGCAACGTGTTCGCGCTCAAGGGCGATCACCGCCTTACCCGGCTTGCTC                                                 >  2:1257117/1‑77                                                                                                                GGCGATCACCGCCTTACCCGGCTTGCTCGCGCCCTTGAGCGCGAACACGTTGCGCCAACGGCGCACACGAGTGAA  >  1:215183/1‑75                                                                                                                GGCGATCACCGCCTTACCCGGCTTGCTCGCGCCCTTGAGCGCGAACACGTTGCGCCAACGGCGCACACGAGTGAA  <  2:215183/75‑1                                                                                                                                                                                            GGCGTGAGCCTGGCAATCCTTGCCACCGGCATCGACTCCGGCGGTCACCATACGCATGAGGTATACCAATTCACTCGTGTGCGCCGTTGGCGCAACGTGTTCGCGCTCAAGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3427418‑3427532 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgATCACCGCCTTACCCGGCTTGCTCGCGCCCTTGAGCGCGAACACGTTGCGCCAACGGCGCACACGAGTGAA  <  NC_002947/3427557‑3427487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.