New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4785811 = | 52 (1.060) | 3 (0.060) | 3/244 | NT | 5.6% | coding (1548/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
? | NC_002947 | 4785847 = | 51 (1.070) | coding (1512/7887 nt) | pvdJ | non‑ribosomal peptide synthetase |
CGGCACCTGCCAGCCGGCTGCTGGACTGTGTCGGTGATGCCGATGCGGTTTTGCACGGTGAGCCCGCGAGCTTCCCTTGCACGGACTTTCTCAGCCTGTTCCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4785947‑4785811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGAACAGGCTGAGAAAGTCCGTGCAAGGGAAGCTCGCGGGCTCACCGTGCAA > NC_002947/4785847‑4785897 CGGCACCTGCCAGCCGGCTGCTGGACTGTGTCGGTGATGCCGATGCGGTTTTGCACGGTGAGCCCGCGAGCTTCCCTTGCACGGACTTTCTCAGCCTGTTCCGCGGGGCGCTCGCCGGCATTGGCCAGCGCCCGGCGGAACAGGCTGAGA < 2:404371/150‑1 TTGCACGGTGAGCCCGCGAGCTTCCCTTGCACGGACTTTCTCAGCCTGTTCCGCGGGGCGCTCGCCGGCATTGGCCAGCGCCCGGCGGAACAGGCTGAGAAAGTCCGTGCAAG < 1:968780/113‑1 CTTGCACGGACTTTCTCAGCCTGTTCCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCGGAACAGGCTGAGAAAGTCCGTGCAAGGGAAGCTCGCGGGCTCACCGTGCAA < 2:968780/113‑1 CGGCACCTGCCAGCCGGCTGCTGGACTGTGTCGGTGATGCCGATGCGGTTTTGCACGGTGAGCCCGCGAGCTTCCCTTGCACGGACTTTCTCAGCCTGTTCCGCCGGGCGCTGGCCAATGCCGGCGAGCGCCCCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4785947‑4785811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgGAACAGGCTGAGAAAGTCCGTGCAAGGGAAGCTCGCGGGCTCACCGTGCAA > NC_002947/4785847‑4785897 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |