New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4954392	41 (0.840)	3 (0.060)	3/244	NT	7.0%	coding (85/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator
	?	NC_002947	= 4954427	40 (0.840)					coding (50/1692 nt)	PP_4363	two‑component system sensor histidine kinase/response regulator

CTTCGCCAGCCAATGCCTTGATCTGCCGCGCCGCCTCGAAGCCATCCATGACCGGCATCAGGGCGTCCAGCAGCACCAGTTGCGGGCGCCGCTCGAGGTACAGCGCTACCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4954242‑4954392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGGGGCATCAGGTATTCACCGCTGAAAACGGCGAGCAGGCGGTAGCGCTGTACCTCGAGCGGCGCCCGCAACTGGTGCTGCTGGACGCCCTGATGCCGGTCATGGATGGCTT  <  NC_002947/4954427‑4954280                                                                                                                                                                                                                                                                                                             CTTCGCCAGCCAATGCCTTGATCTGCCGCGCCGCCTCGAAGCCATCCATGACCGGCATCAGGGCGTCCAGCAGCACCAGTTGCGGGCGCCGCTCGAGGTACAGCGCTACCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCT                                                                                                                                                       <  2:1022593/150‑1                                                    CCGGCATCAGGGCGTCCAGCAGCACCAGTTGCGGGCGCCGCTCGAGGTACAGCGCTAGCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCTGTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGGGGCATCAGGTA                                                                                                    <  1:338055/150‑1                                                                                                   TACAGCGCTACCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCTGTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGG                                                                                                               >  1:1215658/1‑92                                                                                                   TACAGCGCTACCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCTGTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGG                                                                                                               <  2:1215658/92‑1                                                                                                                                                     CTGTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGGGGCATCAGGTATTCACCGCTGAAAACGGCGAGCAGGCGGTAGCGCTGTACCTCGAGCGGCGCCCGCAACTGGTGCTGCTGGACGCCCTGATGCCGGTCATGGATGGCT   >  2:362352/1‑150                                                                                                                                                      TGTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGGGGCATCAGGTATTCACCGCTGAAAACGGCGAGCAGGCGGTAGCGCTGTACCTCGAGCGGCGCCCGCAACTGGTGCTGCTGGACGCCCTGATGCCGGTCATGGATGGCTT  <  1:35701/150‑1                                                                                                                                                                                                                                                                                                             CTTCGCCAGCCAATGCCTTGATCTGCCGCGCCGCCTCGAAGCCATCCATGACCGGCATCAGGGCGTCCAGCAGCACCAGTTGCGGGCGCCGCTCGAGGTACAGCGCTACCGCCTGCTCGCCGTTTTCAGCGGTGAATACCTGATGCCCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4954242‑4954392 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgTCGATCGCCTTCTGCTTGCGCAGATCGTGCGTCGCCAGGGGCATCAGGTATTCACCGCTGAAAACGGCGAGCAGGCGGTAGCGCTGTACCTCGAGCGGCGCCCGCAACTGGTGCTGCTGGACGCCCTGATGCCGGTCATGGATGGCTT  <  NC_002947/4954427‑4954280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.