New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4240195 =	74 (1.510)	5 (0.110)	4/226	NT	7.7%	coding (139/900 nt)	PP_3717	LuxR family transcriptional regulator
	?	NC_002947	4240236 =	53 (1.200)					coding (98/900 nt)	PP_3717	LuxR family transcriptional regulator

CCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTT  >  NC_002947/4240046‑4240340                                                                                                                                                      |                                                                                                                                                        ccGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAg                                                                                                                                                         >  2:194179/1‑150 (MQ=255)  cGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAgg                                                                                                                                                        <  1:459269/150‑1 (MQ=255)  cGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAgg                                                                                                                                                        <  1:302588/150‑1 (MQ=255)  atcattgagaccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                        >  1:1031494‑M1/149‑150 (MQ=255)      gCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCGTGGGCCAGGgc‑‑‑‑‑‑gc                                                                                                                                              <  2:259205/150‑1 (MQ=255)        cGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGgc‑‑‑‑‑‑gcgc                                                                                                                                            >  2:435297/1‑150 (MQ=255)         gTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCt                                                                                                                                           >  1:1104635/1‑150 (MQ=255)         gTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCt                                                                                                                                           >  1:899874/1‑150 (MQ=255)            ccgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGC‑‑‑‑‑‑GCGCTGCa                                                                                                                                        >  1:1252014‑M1/139‑150 (MQ=255)             cgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgc                                                                                                                                                      <  1:244916‑M1/4‑1 (MQ=255)             cgcgcgtgaactcacggcgcttggcctgtaccaaggccgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgc                                                                                                                                                      >  2:244916‑M1/138‑141 (MQ=255)                 aTGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGCGGGTTTCACCATGGGCCAGTGC‑‑‑‑‑‑TCTCTGCAACGcc                                                                                                                                   >  2:277690/1‑150 (MQ=255)                      ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTg                                                                                                                              >  2:722424/1‑150 (MQ=255)                      ttGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTg                                                                                                                              >  1:15169/1‑150 (MQ=255)                       tGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGc                                                                                                                             <  1:194179/150‑1 (MQ=255)                       tGCCGGTACAGCAACTCCGGCGCCCGCACCTGGCTCTCAAGGCCGATCATCATCGACTCCACCTGCAACAGCTGGCCGATGGCAGCGGCCACATACACCAGCGCCTCAGGGGTTTCACCATGAGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGc                                                                                                                             <  2:523135/150‑1 (MQ=255)                            gTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCActg                                                                                                                        >  2:301575/1‑150 (MQ=255)                               cAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCActgctg                                                                                                                     <  1:1118225/150‑1 (MQ=255)                                aGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCa                                                                                                                           >  1:560421/1‑143 (MQ=255)                                aGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCa                                                                                                                           <  2:560421/143‑1 (MQ=255)                                aGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACtgctgc                                                                                                                    >  2:253137/1‑150 (MQ=255)                                 gCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCa                                                                                                                   <  1:253137/150‑1 (MQ=255)                                  cAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAg                                                                                                                  >  1:147524/1‑150 (MQ=255)                                       gcggcgCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAgcgcgc                                                                                                             <  1:1133191/150‑1 (MQ=255)                                        cggcgCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGTGCGcc                                                                                                            >  2:361194/1‑150 (MQ=255)                                          gcgcCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCa                                                                                                          >  2:1217622/1‑150 (MQ=255)                                             cccgcccCTGGCACTCAAGGCTGCTCATCATCGACTCCCCCTGCACCAACTGGCCGCTGGCAGCAGCCACATGCTCCACCGCCTCGGGGGTTTCACCATGGCCCCGGGG‑‑‑‑‑‑GCGCTGCAACGCCACATGCCACTGCTGCCGTCCGCCCATtg                                                                                                       >  2:32025/1‑150 (MQ=255)                                                gcccCTGGCACTCAAGGCTGCTACTCCTCGCCTCGGCCTTTAGCAACTTGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                    <  2:1104635/150‑1 (MQ=255)                                                gcccCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGa                                                                                                    <  2:899874/150‑1 (MQ=255)                                                 ccccTGGCACTCAAGGCTGATCATCCTCGCCTCCACCTCCTCCAACTGCCCGATGGCAGCGGCCACATACTCCCTCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAg                                                                                                   <  1:725391/150‑1 (MQ=255)                                                  cgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgc‑‑‑‑‑‑gcgc                                                                                                                                            >  1:46938‑M1/101‑108 (MQ=255)                                                  cgatgaacctggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGgc‑‑‑‑‑‑gcgc                                                                                                                                            <  2:46938‑M1/8‑1 (MQ=255)                                                   ccTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAggg                                                                                                 <  1:301575/150‑1 (MQ=255)                                                       gCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAAc                                                                                                                                      <  1:328607/109‑1 (MQ=255)                                                       gCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAAc                                                                                                                                      >  2:328607/1‑109 (MQ=255)                                                       gCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAg                                                                                             >  2:344152/1‑150 (MQ=255)                                                           tggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                        >  1:402155‑M1/92‑93 (MQ=255)                                                           tggcgcaaagggctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatgg                                                                                                                                                        <  2:402155‑M1/2‑1 (MQ=255)                                                           tCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAg                                                                                             <  1:1133365/146‑1 (MQ=255)                                                           tCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAg                                                                                             >  2:1133365/1‑146 (MQ=255)                                                           tCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCggg                                                                                         >  1:1104700/1‑150 (MQ=255)                                                                  tGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCGCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCGCATTGTGAGGGTAAGCGGGGTATCgg                                                                                  <  2:166203/150‑1 (MQ=255)                                                                     tcatcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGgag                                                                               >  2:69137/1‑150 (MQ=255)                                                                       ctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                        <  1:209388‑M1/44‑1 (MQ=255)                                                                       ctgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                        >  2:209388‑M1/80‑123 (MQ=255)                                                                        tgtgcgcgggcgtgcctggcaggctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcaccatGGGCCAGGGCGCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCgg                                                                                  >  2:340430‑M1/79‑150 (MQ=255)                                                                        tcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAAc                                                                                                                                      <  1:238314/92‑1 (MQ=255)                                                                        tcatcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAAc                                                                                                                                      >  2:238314/1‑92 (MQ=255)                                                                          atcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGcc                                                                          >  2:844960/1‑150 (MQ=255)                                                                           tcGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCt                                                                         >  1:562008/1‑150 (MQ=255)                                                                             gACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTgg                                                                       <  1:1217622/150‑1 (MQ=255)                                                                             gACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTgg                                                                       <  2:562008/150‑1 (MQ=255)                                                                               cTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATtgt                                                                                                      >  1:778108/1‑117 (MQ=255)                                                                               cTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATtgt                                                                                                      <  2:778108/117‑1 (MQ=255)                                                                                tCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTc                                                                    >  1:1270122/1‑150 (MQ=255)                                                                                     cTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGCGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGcc                                                               >  1:413031/1‑150 (MQ=255)                                                                                          ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCGACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                          <  2:147524/150‑1 (MQ=255)                                                                                          ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                          <  2:413031/150‑1 (MQ=255)                                                                                          ccAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCa                                                          >  1:411213/1‑150 (MQ=255)                                                                                           cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGcc                                                               >  1:623262/1‑144 (MQ=255)                                                                                           cAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGcc                                                               <  2:623262/144‑1 (MQ=255)                                                                                              gctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                        >  2:1176088‑M1/57‑100 (MQ=255)                                                                                              gctagactgccgggcatgacccaggcctctcccgataccccgcttaccctcacaatGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCAtt                                                                                                        <  1:1176088‑M1/44‑1 (MQ=255)                                                                                               tGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTa                                                     >  2:3445/1‑150 (MQ=255)                                                                                                ggCCGATGGCAGCGGCCACATACGCCAGCGCCTCGTGGGTTTCACCATGGGCCACGCC‑‑‑‑‑‑GCGCTGCAACGGCACGCGCCCCTGCTGCCGCGCGCCCATTGGGAGGGGAAGCGGAGTATCGGGAGAGTCCTGGGTCATGCCCTGCAGTCTAg                                                    <  2:404663/150‑1 (MQ=255)                                                                                                 gCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                   <  2:901117/150‑1 (MQ=255)                                                                                                   cGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCt                                                 >  1:632022/1‑150 (MQ=255)                                                                                                       ggCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGTGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCa                                             <  1:361194/150‑1 (MQ=255)                                                                                                       ggCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCa                                             <  1:3445/150‑1 (MQ=255)                                                                                                               ccACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGcc                                     <  1:69137/150‑1 (MQ=255)                                                                                                                cacaTACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGccc                                    >  2:528301/1‑150 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATg                                                                 <  1:1150164/114‑1 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATg                                                                 >  2:1150164/1‑114 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                   >  1:393155/1‑128 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGc                                                   <  2:393155/128‑1 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                             <  2:291002/150‑1 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                             <  1:528301/150‑1 (MQ=255)                                                                                                                       tCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGcaca                             <  2:15169/150‑1 (MQ=255)                                                                                                                          aGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGcc                          <  1:722424/150‑1 (MQ=255)                                                                                                                              ccTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCttt                      <  2:632022/150‑1 (MQ=255)                                                                                                                               cTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                     <  1:844960/150‑1 (MQ=255)                                                                                                                               cTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTg                     >  1:892748/1‑150 (MQ=255)                                                                                                                                tCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                          >  1:298935/1‑80 (MQ=255)                                                                                                                                tCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCgg                                                                                          <  2:298935/80‑1 (MQ=255)                                                                                                                                     ggTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAg               <  2:1104700/150‑1 (MQ=255)                                                                                                                                            ccATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATc        <  2:892748/150‑1 (MQ=255)                                                                                                                                             cATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTggg                                                                      <  2:412864/87‑1 (MQ=255)                                                                                                                                             cATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTggg                                                                      >  1:412864/1‑87 (MQ=255)                                                                                                                                             cATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCg       >  1:202391/1‑150 (MQ=255)                                                                                                                                              aTGGGCCAGCGC‑‑‑‑‑‑GCGCTGCAACGCCACGGGCCACTGCTGCAGCGCGCACATCGTAAGGGTAAGCGGGGTATCGGGAGAGGCCTAGGTCATGCCCGGCAGCCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCgg      <  1:32025/150‑1 (MQ=255)                                                                                                                                                 ggCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCt   <  1:277690/150‑1 (MQ=255)                                                                                                                                                  gCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCCGGTTCATCGGCCtt  >  2:69023/1‑150 (MQ=255)                                                                                                                                                   ccAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                  <  2:73677/85‑1 (MQ=255)                                                                                                                                                   ccAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCAt                                                                  >  1:73677/1‑85 (MQ=255)                                                                                                                                                      |                                                                                                                                                        CCGATGCCGTTCGGGGATGCCTTGCTGGTACAGCAACTGCGGCGCCCGCCCCTGGCACTCAAGGCTGATCATCATCGACTCCACCTGCACCAACTGGCCGATGGCAGCGGCCACATACTCCAGCGCCTCGGGGGTTTCACCATGGGCCAGGGC‑‑‑‑‑‑GCGCTGCAACGCCACGTGCCACTGCTGCAGCGCGCCCATTGTGAGGGTAAGCGGGGTATCGGGAGAGGCCTGGGTCATGCCCGGCAGTCTAGCCTGCCAGGCACGCCCGCGCACAGCCCTTTGCGCCAGGTTCATCGGCCTT  >  NC_002947/4240046‑4240340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.